Basic Information:

  VIRBase ID:  

VHID00677472

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          MAP9:  NM_001039580     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	MAP9
miRBase Accession/Entrez ID	MIMAT0010150	79884
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	ASAP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MAP9	chr4:156290480(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MAP9	chr4:156266588-156266589(-) m6A 3'UTR       24981863 chr4:156268733-156268734(-) m6A 3'UTR       24981863 chr4:156268739-156268740(-) m6A 3'UTR       24981863 chr4:156268749-156268750(-) m6A 3'UTR       24981863 chr4:156268760-156268761(-) m6A 3'UTR       24981863 chr4:156268821-156268822(-) m6A 3'UTR       24981863 chr4:156268957-156268958(-) m6A CDS       24981863//22608085 chr4:156269021-156269022(-) m6A CDS       24981863//22608085 chr4:156269042-156269043(-) m6A CDS       24981863//22608085 chr4:156271333-156271334(-) m6A 3'UTR//intron       24981863//22608085 chr4:156273777-156273778(-) m6A CDS       24981863//22608085 chr4:156273810-156273811(-) m6A CDS       24981863//22608085 chr4:156274109-156274110(-) m6A 3'UTR//CDS       24981863//22608085 chr4:156274125-156274126(-) m6A 3'UTR//CDS       24981863//22608085 chr4:156274371-156274372(-) m6A 3'UTR//CDS       24981863//27371828//22608085 chr4:156274382-156274383(-) m6A 3'UTR//CDS       24981863//27371828//22608085 chr4:156276225-156276226(-) m6A 3'UTR//CDS       24981863//22608085 chr4:156276244-156276245(-) m6A 3'UTR//CDS       24981863//22608085 chr4:156276906-156276907(-) m6A CDS//intron       22608085 chr4:156276918-156276919(-) m6A CDS//intron       22608085 chr4:156276930-156276931(-) m6A CDS//intron       22608085 chr4:156276937-156276938(-) m6A CDS//intron       22608085 chr4:156276989-156276990(-) m6A CDS//intron       24981863 chr4:156278667-156278668(-) m6A CDS       24981863 chr4:156281387-156281388(-) m6A CDS       24981863//22608085 chr4:156281409-156281410(-) m6A CDS       24981863//22608085 chr4:156281454-156281455(-) Y CDS       26075521 chr4:156281491-156281492(-) m6A CDS       24981863//22608085 chr4:156294321-156294322(-) m6A CDS//exon       24981863 chr4:156294327-156294328(-) m6A CDS//exon       24981863 chr4:156294343-156294344(-) m6A CDS//exon       24981863 chr4:156294400-156294401(-) m6A CDS//exon       24981863//22608085 chr4:156294488-156294489(-) m6A CDS//exon       22608085 chr4:156294504-156294505(-) m6A CDS//exon       22608085 chr4:156297639-156297640(-) m6A 5'UTR//intron       24981863 chr4:156297697-156297698(-) m6A 5'UTR//intron       27371828//27773536 chr4:156297801-156297802(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr4:156297807-156297808(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr4:156297831-156297832(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr4:156297843-156297844(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr4:156297870-156297871(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr4:156297927-156297928(-) m6A 5'UTR//exon       25456834//24981863//27773536//22608085 chr4:156297956-156297957(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MAP9	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: MAP9

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg