Basic Information:

  VIRBase ID:  

VHID00677401

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          SAP130:  NM_001330301     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	SAP130
miRBase Accession/Entrez ID	MIMAT0010150	79595
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SAP130	chr2:128706109(-) A-I      intronic chr2:128746312(-) A-I      intronic chr2:128759678(-) A-I      intronic chr2:128759679(-) A-I      intronic chr2:128759683(-) A-I      intronic chr2:128759691(-) A-I      intronic chr2:128761995(-) A-I      intronic chr2:128762000(-) A-I      intronic chr2:128762001(-) A-I      intronic chr2:128762022(-) A-I      intronic chr2:128746267(-) A-I      intronic chr2:128759704(-) A-I      intronic chr2:128706135(-) A-I      intronic chr2:128759719(-) A-I      intronic chr2:128706133(-) A-I      intronic chr2:128777238(-) A-I      intronic chr2:128777242(-) A-I      intronic chr2:128777268(-) A-I      intronic chr2:128706143(-) A-I      intronic chr2:128759720(-) A-I      intronic chr2:128766958(-) A-I      intronic chr2:128746258(-) A-I      intronic chr2:128746261(-) A-I      intronic chr2:128706112(-) A-I      intronic chr2:128761983(-) A-I      intronic chr2:128761981(-) A-I      intronic chr2:128703274(-) A-I      intronic chr2:128703332(-) A-I      intronic chr2:128704265(-) A-I      intronic chr2:128704277(-) A-I      intronic chr2:128704320(-) A-I      intronic chr2:128704371(-) A-I      intronic chr2:128704406(-) A-I      intronic chr2:128780542(-) A-I      intronic chr2:128777303(-) A-I      intronic chr2:128777012(-) A-I      intronic chr2:128713199(-) A-I      intronic chr2:128715066(-) A-I      intronic chr2:128769961(-) A-I      intronic chr2:128769944(-) A-I      intronic chr2:128769684(-) A-I      intronic chr2:128769661(-) A-I      intronic chr2:128769639(-) A-I      intronic chr2:128769489(-) A-I      intronic chr2:128767039(-) A-I      intronic chr2:128767023(-) A-I      intronic chr2:128762999(-) A-I      intronic chr2:128762974(-) A-I      intronic chr2:128762965(-) A-I      intronic chr2:128715174(-) A-I      intronic chr2:128745780(-) A-I      intronic chr2:128762014(-) A-I      intronic chr2:128762005(-) A-I      intronic chr2:128760999(-) A-I      intronic chr2:128760998(-) A-I      intronic chr2:128760972(-) A-I      intronic chr2:128760864(-) A-I      intronic chr2:128760040(-) A-I      intronic chr2:128759890(-) A-I      intronic chr2:128759865(-) A-I      intronic chr2:128757109(-) A-I      intronic chr2:128757095(-) A-I      intronic chr2:128751450(-) A-I      intronic chr2:128748953(-) A-I      intronic chr2:128748944(-) A-I      intronic chr2:128748810(-) A-I      intronic chr2:128748605(-) A-I      intronic chr2:128748581(-) A-I      intronic chr2:128746851(-) A-I      intronic chr2:128746801(-) A-I      intronic chr2:128745994(-) A-I      intronic chr2:128745962(-) A-I      intronic chr2:128744942(-) A-I      intronic chr2:128738445(-) A-I      intronic chr2:128738419(-) A-I      intronic chr2:128738402(-) A-I      intronic chr2:128738394(-) A-I      intronic chr2:128737680(-) A-I      intronic chr2:128734962(-) A-I      intronic chr2:128734892(-) A-I      intronic chr2:128734301(-) A-I      intronic chr2:128733693(-) A-I      intronic chr2:128733557(-) A-I      intronic chr2:128733543(-) A-I      intronic chr2:128733530(-) A-I      intronic chr2:128732382(-) A-I      intronic chr2:128732340(-) A-I      intronic chr2:128732275(-) A-I      intronic chr2:128732265(-) A-I      intronic chr2:128732255(-) A-I      intronic chr2:128732231(-) A-I      intronic chr2:128732225(-) A-I      intronic chr2:128732171(-) A-I      intronic chr2:128731103(-) A-I      intronic chr2:128731087(-) A-I      intronic chr2:128729133(-) A-I      intronic chr2:128729024(-) A-I      intronic chr2:128728998(-) A-I      intronic chr2:128715197(-) A-I      intronic chr2:128762028(-) A-I      intronic chr2:128720974(-) A-I      intronic chr2:128721755(-) A-I      intronic chr2:128722626(-) A-I      intronic chr2:128723216(-) A-I      intronic chr2:128724165(-) A-I      intronic chr2:128724269(-) A-I      intronic chr2:128725822(-) A-I      intronic chr2:128725958(-) A-I      intronic chr2:128727636(-) A-I      intronic chr2:128727645(-) A-I      intronic chr2:128727719(-) A-I      intronic chr2:128727720(-) A-I      intronic chr2:128716278(-) A-I      intronic chr2:128728663(-) A-I      intronic chr2:128728799(-) A-I      intronic chr2:128731105(-) A-I      intronic chr2:128781119(-) A-I      intronic chr2:128780544(-) A-I      intronic chr2:128700337(-) A-I      intronic chr2:128716338(-) A-I      intronic chr2:128716427(-) A-I      intronic chr2:128701671(-) A-I      intronic chr2:128701855(-) A-I      intronic chr2:128716434(-) A-I      intronic chr2:128718731(-) A-I      intronic chr2:128718752(-) A-I      intronic chr2:128718791(-) A-I      intronic chr2:128718949(-) A-I      intronic chr2:128719001(-) A-I      intronic chr2:128719017(-) A-I      intronic chr2:128701856(-) A-I      intronic chr2:128702099(-) A-I      intronic chr2:128702100(-) A-I      intronic chr2:128720872(-) A-I      intronic chr2:128720882(-) A-I      intronic chr2:128746779(-) A-I      intronic chr2:128715198(-) A-I      intronic chr2:128718972(-) A-I      intronic chr2:128763127(-) A-I      intronic chr2:128762053(-) A-I      intronic chr2:128715004(-) A-I      intronic chr2:128715132(-) A-I      intronic chr2:128715182(-) A-I      intronic chr2:128725751(-) A-I      intronic chr2:128738388(-) A-I      intronic chr2:128761117(-) A-I      intronic chr2:128746221(-) A-I      intronic chr2:128737613(-) A-I      intronic chr2:128735348(-) A-I      intronic chr2:128726204(-) A-I      intronic chr2:128777062(-) A-I      intronic chr2:128715061(-) A-I      intronic chr2:128760020(-) A-I      intronic chr2:128769922(-) A-I      intronic chr2:128766458(-) A-I      intronic chr2:128706172(-) A-I      intronic chr2:128769787(-) A-I      intronic chr2:128737726(-) A-I      intronic chr2:128780840(-) A-I      intronic chr2:128737733(-) A-I      intronic chr2:128780912(-) A-I      intronic chr2:128714640(-) A-I      intronic chr2:128746395(-) A-I      intronic chr2:128715005(-) A-I      intronic chr2:128703312(-) A-I      intronic chr2:128725918(-) A-I      intronic chr2:128703426(-) A-I      intronic chr2:128781232(-) A-I      intronic chr2:128728698(-) A-I      intronic chr2:128734898(-) A-I      intronic chr2:128760056(-) A-I      intronic chr2:128725775(-) A-I      intronic chr2:128734384(-) A-I      intronic chr2:128701721(-) A-I      intronic chr2:128737455(-) A-I      intronic chr2:128759563(-) A-I      intronic chr2:128701666(-) A-I      intronic chr2:128780825(-) A-I      intronic chr2:128769655(-) A-I      intronic chr2:128733649(-) A-I      intronic chr2:128746848(-) A-I      intronic chr2:128776028(-) A-I      intronic chr2:128781835(-) A-I      intronic chr2:128776934(-) A-I      intronic chr2:128726157(-) A-I      intronic chr2:128766431(-) A-I      intronic chr2:128751485(-) A-I      intronic chr2:128732346(-) A-I      intronic chr2:128715100(-) A-I      intronic chr2:128705512(-) A-I      intronic chr2:128746853(-) A-I      intronic chr2:128759871(-) A-I      intronic chr2:128760003(-) A-I      intronic chr2:128713167(-) A-I      intronic chr2:128782270(-) A-I      intronic chr2:128733655(-) A-I      intronic chr2:128759872(-) A-I      intronic chr2:128766864(-) A-I      intronic chr2:128702272(-) A-I      intronic chr2:128746805(-) A-I      intronic chr2:128718647(-) A-I      intronic chr2:128734408(-) A-I      intronic chr2:128715955(-) A-I      intronic chr2:128728649(-) A-I      intronic chr2:128763106(-) A-I      intronic chr2:128759991(-) A-I      intronic chr2:128718728(-) A-I      intronic chr2:128760057(-) A-I      intronic chr2:128718959(-) A-I      intronic chr2:128776563(-) A-I      intronic chr2:128746783(-) A-I      intronic chr2:128781349(-) A-I      intronic chr2:128763137(-) A-I      intronic chr2:128728653(-) A-I      intronic chr2:128737630(-) A-I      intronic chr2:128721084(-) A-I      intronic chr2:128738274(-) A-I      intronic chr2:128734362(-) A-I      intronic chr2:128777339(-) A-I      intronic chr2:128702469(-) A-I      intronic chr2:128759629(-) A-I      intronic chr2:128731465(-) A-I      intronic chr2:128704422(-) A-I      intronic chr2:128701689(-) A-I      intronic chr2:128769668(-) A-I      intronic chr2:128766460(-) A-I      intronic chr2:128716452(-) A-I      intronic chr2:128733657(-) A-I      intronic chr2:128734452(-) A-I      intronic chr2:128770030(-) A-I      intronic chr2:128766936(-) A-I      intronic chr2:128780602(-) A-I      intronic chr2:128724220(-) A-I      intronic chr2:128721643(-) A-I      intronic chr2:128713341(-) A-I      intronic chr2:128703502(-) A-I      intronic chr2:128718777(-) A-I      intronic chr2:128725779(-) A-I      intronic chr2:128746329(-) A-I      intronic chr2:128732327(-) A-I      intronic chr2:128771382(-) A-I      intronic chr2:128729941(-) A-I      intronic chr2:128737584(-) A-I      intronic chr2:128780456(-) A-I      intronic chr2:128776980(-) A-I      intronic chr2:128766878(-) A-I      intronic chr2:128705450(-) A-I      intronic chr2:128746854(-) A-I      intronic chr2:128778952(-) A-I      intronic chr2:128780603(-) A-I      intronic chr2:128781164(-) A-I      intronic chr2:128780841(-) A-I      intronic chr2:128766901(-) A-I      intronic chr2:128704212(-) A-I      intronic chr2:128760969(-) A-I      intronic chr2:128760072(-) A-I      intronic chr2:128782178(-) A-I      intronic chr2:128744856(-) A-I      intronic chr2:128703279(-) A-I      intronic chr2:128732374(-) A-I      intronic chr2:128749149(-) A-I      intronic chr2:128766975(-) A-I      intronic chr2:128768316(-) A-I      intronic chr2:128761105(-) A-I      intronic chr2:128763120(-) A-I      intronic chr2:128725089(-) A-I      intronic chr2:128726165(-) A-I      intronic chr2:128731479(-) A-I      intronic chr2:128738424(-) A-I      intronic chr2:128704454(-) A-I      intronic chr2:128750132(-) A-I      intronic chr2:128746943(-) A-I      intronic chr2:128766282(-) A-I      intronic chr2:128732356(-) A-I      intronic chr2:128714790(-) A-I      intronic chr2:128723302(-) A-I      intronic chr2:128721056(-) A-I      intronic chr2:128702003(-) A-I      intronic chr2:128731531(-) A-I      intronic chr2:128727496(-) A-I      intronic chr2:128728694(-) A-I      intronic chr2:128728802(-) A-I      intronic chr2:128738457(-) A-I      intronic chr2:128734321(-) A-I      intronic chr2:128705528(-) A-I      intronic chr2:128723264(-) A-I      intronic chr2:128766432(-) A-I      intronic chr2:128781097(-) A-I      intronic chr2:128745941(-) A-I      intronic chr2:128782217(-) A-I      intronic chr2:128760592(-) A-I      intronic chr2:128777243(-) A-I      intronic chr2:128705403(-) A-I      intronic chr2:128723179(-) A-I      intronic chr2:128745824(-) A-I      intronic chr2:128728786(-) A-I      intronic chr2:128734272(-) A-I      intronic chr2:128782121(-) A-I      intronic chr2:128766054(-) A-I      intronic chr2:128702376(-) A-I      intronic chr2:128766486(-) A-I      intronic chr2:128718661(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SAP130	chr2:128731531(-) A-I intron -    21960545 chr2:128701689(-) A-G intron -    22484847 chr2:128703426(-) A-G intron -    22484847 chr2:128705450(-) A-G intron -    22484847 chr2:128705645(-) A-G intron -    22484847 chr2:128714790(-) A-G intron -    22484847 chr2:128715061(-) A-G intron -    22484847 chr2:128715100(-) A-G intron -    22484847 chr2:128716451(-) A-G intron -    22484847 chr2:128716452(-) A-G intron -    22484847 chr2:128720948(-) A-G intron -    22484847 chr2:128721643(-) A-G intron -    22484847 chr2:128721712(-) A-G intron -    22484847 chr2:128723264(-) A-G intron -    22484847 chr2:128725076(-) A-G intron -    22484847 chr2:128725089(-) A-G intron -    22484847 chr2:128725918(-) A-G intron -    22484847 chr2:128727423(-) A-G intron -    22484847 chr2:128728786(-) A-G intron -    22484847 chr2:128731601(-) A-G intron -    22484847 chr2:128732327(-) A-G intron -    22484847 chr2:128732346(-) A-G intron -    22484847 chr2:128732356(-) A-G intron -    22484847 chr2:128732374(-) A-G intron -    22484847 chr2:128733625(-) A-G intron -    22484847 chr2:128733649(-) A-G intron -    22484847 chr2:128733655(-) A-G intron -    22484847 chr2:128733657(-) A-G intron -    22484847 chr2:128734272(-) A-G intron -    22484847 chr2:128734362(-) A-G intron -    22484847 chr2:128734384(-) A-G intron -    22484847 chr2:128734401(-) A-G intron -    22484847 chr2:128734408(-) A-G intron -    22484847 chr2:128734452(-) A-G intron -    22484847 chr2:128735348(-) A-G intron -    22484847 chr2:128737733(-) A-G intron -    22484847 chr2:128738388(-) A-G intron -    22484847 chr2:128738457(-) A-G intron -    22484847 chr2:128746324(-) A-G intron -    22484847 chr2:128746329(-) A-G intron -    22484847 chr2:128746395(-) A-G intron -    22484847 chr2:128746811(-) A-G intron -    22484847 chr2:128746848(-) A-G intron -    22484847 chr2:128746853(-) A-G intron -    22484847 chr2:128746854(-) A-G intron -    22484847 chr2:128750089(-) T-C intron -    22484847 chr2:128759694(-) A-G intron -    22484847 chr2:128759871(-) A-G intron -    22484847 chr2:128759872(-) A-G intron -    22484847 chr2:128759991(-) A-G intron -    22484847 chr2:128760003(-) A-G intron -    22484847 chr2:128760018(-) T-C intron -    22484847 chr2:128760056(-) A-G intron -    22484847 chr2:128760057(-) A-G intron -    22484847 chr2:128760072(-) A-G intron -    22484847 chr2:128763127(-) A-G intron -    22484847 chr2:128763137(-) A-G intron -    22484847 chr2:128763373(-) G-A intron -    22484847 chr2:128769793(-) A-G intron -    22484847 chr2:128769935(-) A-G intron -    22484847 chr2:128777339(-) A-G intron -    22484847 chr2:128780403(-) G-T intron -    22484847 chr2:128780840(-) A-G intron -    22484847 chr2:128780912(-) A-G intron -    22484847 chr2:128781164(-) A-G intron -    22484847 chr2:128781310(-) A-G intron -    22484847 chr2:128781337(-) A-G intron -    22484847 chr2:128782217(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SAP130	chr2:128698813-128698814(-) m6A 3'UTR       27773535 chr2:128698962-128698963(-) m6A 3'UTR       27773535 chr2:128699010-128699011(-) m6A 3'UTR       24209618//27773535 chr2:128699040-128699041(-) m6A 3'UTR       24284625//24209618//27773535//22608085 chr2:128699159-128699160(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr2:128699191-128699192(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:128699210-128699211(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:128699256-128699257(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:128699358-128699359(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr2:128699401-128699402(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr2:128699443-128699444(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr2:128699492-128699493(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:128699563-128699564(-) Gm 3'UTR       - chr2:128699571-128699572(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085 chr2:128699578-128699579(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085 chr2:128699623-128699624(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr2:128699655-128699656(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr2:128699685-128699686(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr2:128699717-128699718(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr2:128700006-128700007(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr2:128700081-128700082(-) m6A CDS       27773535 chr2:128700099-128700100(-) m6A CDS       27773535 chr2:128712856-128712857(-) m6A CDS       24284625//27773535 chr2:128712911-128712912(-) m6A CDS       24284625//27773535 chr2:128735646-128735647(-) m6A CDS//intron       24284625 chr2:128744446-128744447(-) m6A CDS       24284625 chr2:128747263-128747264(-) m6A CDS       27773535 chr2:128747367-128747368(-) m6A CDS       27773535 chr2:128747401-128747402(-) m6A CDS       27773535 chr2:128747421-128747422(-) m6A CDS       27773535 chr2:128753939-128753940(-) m6A CDS       27773535 chr2:128753973-128753974(-) m6A CDS       24284625//27773535 chr2:128754013-128754014(-) m6A CDS       24284625//27773535 chr2:128757325-128757326(-) m6A CDS       27773535 chr2:128757716-128757717(-) m6A CDS       27773535 chr2:128757904-128757905(-) m6A CDS       27773535 chr2:128773968-128773969(-) m6A CDS       27773535 chr2:128775262-128775263(-) m6A CDS       27773535 chr2:128784862-128784863(-) m6A 5'UTR//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SAP130	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: SAP130

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg