Basic Information:

  VIRBase ID:  

VHID00676539

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          AK3:  NM_001199855     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	AK3
miRBase Accession/Entrez ID	MIMAT0010150	50808
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	AK3L1//AK6//AKL3L//AKL3L1//FIX

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AK3	chr9:4725162(-) A-I      intronic chr9:4728485(-) A-I      intronic chr9:4728463(-) A-I      intronic chr9:4728459(-) A-I      intronic chr9:4728439(-) A-I      intronic chr9:4728414(-) A-I      intronic chr9:4725515(-) A-I      intronic chr9:4725281(-) A-I      intronic chr9:4725218(-) A-I      intronic chr9:4725188(-) A-I      intronic chr9:4721231(-) A-I      intronic chr9:4716940(-) A-I      intronic chr9:4716881(-) A-I      intronic chr9:4716809(-) A-I      intronic chr9:4738255(-) A-I      intronic chr9:4716764(-) A-I      intronic chr9:4715661(-) A-I      intronic chr9:4715036(-) A-I      intronic chr9:4733067(-) A-I      intronic chr9:4733065(-) A-I      intronic chr9:4728488(-) A-I      intronic chr9:4732976(-) A-I      intronic chr9:4732221(-) A-I      intronic chr9:4732186(-) A-I      intronic chr9:4732046(-) A-I      intronic chr9:4736058(-) A-I      intronic chr9:4732026(-) A-I      intronic chr9:4732012(-) A-I      intronic chr9:4732010(-) A-I      intronic chr9:4715510(-) A-I      intronic chr9:4715592(-) A-I      intronic chr9:4715600(-) A-I      intronic chr9:4730565(-) A-I      intronic chr9:4730553(-) A-I      intronic chr9:4736793(-) A-I      intronic chr9:4729262(-) A-I      intronic chr9:4729261(-) A-I      intronic chr9:4735570(-) A-I      intronic chr9:4729214(-) A-I      intronic chr9:4729048(-) A-I      intronic chr9:4732950(-) A-I      intronic chr9:4725139(-) A-I      intronic chr9:4724775(-) A-I      intronic chr9:4715623(-) A-I      intronic chr9:4739809(-) A-I      intronic chr9:4738242(-) A-I      intronic chr9:4725152(-) A-I      intronic chr9:4725085(-) A-I      intronic chr9:4725044(-) A-I      intronic chr9:4724741(-) A-I      intronic chr9:4724667(-) A-I      intronic chr9:4724631(-) A-I      intronic chr9:4721623(-) A-I      intronic chr9:4721603(-) A-I      intronic chr9:4721572(-) A-I      intronic chr9:4715618(-) A-I      intronic chr9:4721321(-) A-I      intronic chr9:4739812(-) A-I      intronic chr9:4738326(-) A-I      intronic chr9:4739339(-) A-I      intronic chr9:4739328(-) A-I      intronic chr9:4739301(-) A-I      intronic chr9:4739221(-) A-I      intronic chr9:4738992(-) A-I      intronic chr9:4738952(-) A-I      intronic chr9:4738951(-) A-I      intronic chr9:4738942(-) A-I      intronic chr9:4738398(-) A-I      intronic chr9:4738379(-) A-I      intronic chr9:4738369(-) A-I      intronic chr9:4738361(-) A-I      intronic chr9:4738344(-) A-I      intronic chr9:4738261(-) A-I      intronic chr9:4738238(-) A-I      intronic chr9:4737732(-) A-I      intronic chr9:4737705(-) A-I      intronic chr9:4737693(-) A-I      intronic chr9:4737516(-) A-I      intronic chr9:4736857(-) A-I      intronic chr9:4736855(-) A-I      intronic chr9:4736817(-) A-I      intronic chr9:4736799(-) A-I      intronic chr9:4736788(-) A-I      intronic chr9:4736775(-) A-I      intronic chr9:4736690(-) A-I      intronic chr9:4736077(-) A-I      intronic chr9:4735893(-) A-I      intronic chr9:4735885(-) A-I      intronic chr9:4735742(-) A-I      intronic chr9:4735741(-) A-I      intronic chr9:4735716(-) A-I      intronic chr9:4735701(-) A-I      intronic chr9:4735647(-) A-I      intronic chr9:4735178(-) A-I      intronic chr9:4735151(-) A-I      intronic chr9:4710346(-) A-I      3'UTR chr9:4710304(-) A-I      3'UTR chr9:4710316(-) A-I      3'UTR chr9:4710305(-) A-I      3'UTR chr9:4710379(-) A-I      3'UTR chr9:4710380(-) A-I      3'UTR chr9:4710801(-) A-I      3'UTR chr9:4710788(-) A-I      3'UTR chr9:4710894(-) A-I      3'UTR chr9:4725604(-) A-I      5'UTR chr9:4710675(-) A-I      3'UTR chr9:4710403(-) A-I      3'UTR chr9:4710241(-) A-I      3'UTR chr9:4725552(-) A-I      5'UTR chr9:4710255(-) A-I      3'UTR chr9:4710280(-) A-I      3'UTR chr9:4728519(-) A-I      intronic chr9:4738360(-) A-I      intronic chr9:4735515(-) A-I      intronic chr9:4737672(-) A-I      intronic chr9:4715678(-) A-I      intronic chr9:4732204(-) A-I      intronic chr9:4737529(-) A-I      intronic chr9:4735871(-) A-I      intronic chr9:4739444(-) A-I      intronic chr9:4725510(-) A-I      intronic chr9:4721340(-) A-I      intronic chr9:4737504(-) A-I      intronic chr9:4732983(-) A-I      intronic chr9:4732938(-) A-I      intronic chr9:4721158(-) A-I      intronic chr9:4729738(-) A-I      intronic chr9:4736738(-) A-I      intronic chr9:4716822(-) A-I      intronic chr9:4730503(-) A-I      intronic chr9:4738940(-) A-I      intronic chr9:4735958(-) A-I      intronic chr9:4730517(-) A-I      intronic chr9:4739016(-) A-I      intronic chr9:4735575(-) A-I      intronic chr9:4732200(-) A-I      intronic chr9:4736033(-) A-I      intronic chr9:4736052(-) A-I      intronic chr9:4725075(-) A-I      intronic chr9:4730597(-) A-I      intronic chr9:4732078(-) A-I      intronic chr9:4729703(-) A-I      intronic chr9:4725289(-) A-I      intronic chr9:4721185(-) A-I      intronic chr9:4721303(-) A-I      intronic chr9:4729149(-) A-I      intronic chr9:4729213(-) A-I      intronic chr9:4728379(-) A-I      intronic chr9:4736774(-) A-I      intronic chr9:4721255(-) A-I      intronic chr9:4728778(-) A-I      intronic chr9:4729589(-) A-I      intronic chr9:4739345(-) A-I      intronic chr9:4716831(-) A-I      intronic chr9:4715103(-) A-I      intronic chr9:4715555(-) A-I      intronic chr9:4715136(-) A-I      intronic chr9:4729148(-) A-I      intronic chr9:4739848(-) A-I      intronic chr9:4729252(-) A-I      intronic chr9:4729765(-) A-I      intronic chr9:4714974(-) A-I      intronic chr9:4738400(-) A-I      intronic chr9:4739801(-) A-I      intronic chr9:4736905(-) A-I      intronic chr9:4732071(-) A-I      intronic chr9:4739845(-) A-I      intronic chr9:4729139(-) A-I      intronic chr9:4732943(-) A-I      intronic chr9:4725206(-) A-I      intronic chr9:4729283(-) A-I      intronic chr9:4728509(-) A-I      intronic chr9:4737535(-) A-I      intronic chr9:4737636(-) A-I      intronic chr9:4729705(-) A-I      intronic chr9:4737656(-) A-I      intronic chr9:4739473(-) A-I      intronic chr9:4738946(-) A-I      intronic chr9:4715617(-) A-I      intronic chr9:4738982(-) A-I      intronic chr9:4737592(-) A-I      intronic chr9:4729613(-) A-I      intronic chr9:4721281(-) A-I      intronic chr9:4735598(-) A-I      intronic chr9:4728408(-) A-I      intronic chr9:4732052(-) A-I      intronic chr9:4738826(-) A-I      intronic chr9:4735131(-) A-I      intronic chr9:4735897(-) A-I      intronic chr9:4730546(-) A-I      intronic chr9:4715502(-) A-I      intronic chr9:4728495(-) A-I      intronic chr9:4738403(-) A-I      intronic chr9:4732961(-) A-I      intronic chr9:4736068(-) A-I      intronic chr9:4715670(-) A-I      intronic chr9:4729078(-) A-I      intronic chr9:4733048(-) A-I      intronic chr9:4710729(-) A-I      3'UTR chr9:4710243(-) A-I      3'UTR chr9:4710674(-) A-I      3'UTR chr9:4710802(-) A-I      3'UTR chr9:4710906(-) A-I      3'UTR chr9:4710823(-) A-I      3'UTR chr9:4710792(-) A-I      3'UTR chr9:4710902(-) A-I      3'UTR chr9:4725534(-) A-I      5'UTR chr9:4710683(-) A-I      3'UTR chr9:4725539(-) A-I      5'UTR chr9:4710828(-) A-I      3'UTR chr9:4710319(-) A-I      3'UTR chr9:4710815(-) A-I      3'UTR chr9:4725135(-) A-I      intronic chr9:4729591(-) A-I      intronic chr9:4735949(-) A-I      intronic chr9:4736929(-) A-I      intronic chr9:4728314(-) A-I      intronic chr9:4733122(-) A-I      intronic chr9:4735870(-) A-I      intronic chr9:4733052(-) A-I      intronic chr9:4739844(-) A-I      intronic chr9:4735203(-) A-I      intronic chr9:4730479(-) A-I      intronic chr9:4729183(-) A-I      intronic chr9:4715535(-) A-I      intronic chr9:4739750(-) A-I      intronic chr9:4729809(-) A-I      intronic chr9:4737552(-) A-I      intronic chr9:4730541(-) A-I      intronic chr9:4738304(-) A-I      intronic chr9:4730516(-) A-I      intronic chr9:4730534(-) A-I      intronic chr9:4724684(-) A-I      intronic chr9:4732182(-) A-I      intronic chr9:4739388(-) A-I      intronic chr9:4733076(-) A-I      intronic chr9:4738928(-) A-I      intronic chr9:4730521(-) A-I      intronic chr9:4732018(-) A-I      intronic chr9:4735546(-) A-I      intronic chr9:4738880(-) A-I      intronic chr9:4715574(-) A-I      intronic chr9:4735177(-) A-I      intronic chr9:4736826(-) A-I      intronic chr9:4738887(-) A-I      intronic chr9:4729778(-) A-I      intronic chr9:4724613(-) A-I      intronic chr9:4735952(-) A-I      intronic chr9:4725126(-) A-I      intronic chr9:4730562(-) A-I      intronic chr9:4724696(-) A-I      intronic chr9:4735670(-) A-I      intronic chr9:4729247(-) A-I      intronic chr9:4733009(-) A-I      intronic chr9:4732114(-) A-I      intronic chr9:4739822(-) A-I      intronic chr9:4729434(-) A-I      intronic chr9:4739397(-) A-I      intronic chr9:4732199(-) A-I      intronic chr9:4738268(-) A-I      intronic chr9:4737637(-) A-I      intronic chr9:4729590(-) A-I      intronic chr9:4735642(-) A-I      intronic chr9:4739466(-) A-I      intronic chr9:4735545(-) A-I      intronic chr9:4725290(-) A-I      intronic chr9:4735576(-) A-I      intronic chr9:4715523(-) A-I      intronic chr9:4736071(-) A-I      intronic chr9:4732230(-) A-I      intronic chr9:4738869(-) A-I      intronic chr9:4729203(-) A-I      intronic chr9:4736950(-) A-I      intronic chr9:4728422(-) A-I      intronic chr9:4738874(-) A-I      intronic chr9:4738438(-) A-I      intronic chr9:4733086(-) A-I      intronic chr9:4739355(-) A-I      intronic chr9:4728405(-) A-I      intronic chr9:4739782(-) A-I      intronic chr9:4724679(-) A-I      intronic chr9:4729282(-) A-I      intronic chr9:4738955(-) A-I      intronic chr9:4735184(-) A-I      intronic chr9:4738977(-) A-I      intronic chr9:4735748(-) A-I      intronic chr9:4724657(-) A-I      intronic chr9:4735682(-) A-I      intronic chr9:4733121(-) A-I      intronic chr9:4729727(-) A-I      intronic chr9:4739045(-) A-I      intronic chr9:4735932(-) A-I      intronic chr9:4735715(-) A-I      intronic chr9:4735672(-) A-I      intronic chr9:4732022(-) A-I      intronic chr9:4738857(-) A-I      intronic chr9:4728449(-) A-I      intronic chr9:4729715(-) A-I      intronic chr9:4738893(-) A-I      intronic chr9:4737632(-) A-I      intronic chr9:4725051(-) A-I      intronic chr9:4738439(-) A-I      intronic chr9:4715422(-) A-I      intronic chr9:4739061(-) A-I      intronic chr9:4739335(-) A-I      intronic chr9:4721580(-) A-I      intronic chr9:4732238(-) A-I      intronic chr9:4724773(-) A-I      intronic chr9:4721556(-) A-I      intronic chr9:4722831(-) A-I      intronic chr9:4729223(-) A-I      intronic chr9:4736848(-) A-I      intronic chr9:4729175(-) A-I      intronic chr9:4721587(-) A-I      intronic chr9:4735540(-) A-I      intronic chr9:4739389(-) A-I      intronic chr9:4721284(-) A-I      intronic chr9:4728327(-) A-I      intronic chr9:4735213(-) A-I      intronic chr9:4725121(-) A-I      intronic chr9:4738345(-) A-I      intronic chr9:4724776(-) A-I      intronic chr9:4739461(-) A-I      intronic chr9:4735927(-) A-I      intronic chr9:4739688(-) A-I      intronic chr9:4737602(-) A-I      intronic chr9:4725161(-) A-I      intronic chr9:4737582(-) A-I      intronic chr9:4715505(-) A-I      intronic chr9:4728447(-) A-I      intronic chr9:4739783(-) A-I      intronic chr9:4739351(-) A-I      intronic chr9:4736896(-) A-I      intronic chr9:4736951(-) A-I      intronic chr9:4738385(-) A-I      intronic chr9:4729181(-) A-I      intronic chr9:4736741(-) A-I      intronic chr9:4735159(-) A-I      intronic chr9:4729578(-) A-I      intronic chr9:4739387(-) A-I      intronic chr9:4736879(-) A-I      intronic chr9:4728353(-) A-I      intronic chr9:4733100(-) A-I      intronic chr9:4729217(-) A-I      intronic chr9:4728752(-) A-I      intronic chr9:4730520(-) A-I      intronic chr9:4730596(-) A-I      intronic chr9:4738233(-) A-I      intronic chr9:4728431(-) A-I      intronic chr9:4716879(-) A-I      intronic chr9:4739040(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AK3	chr9:4729148(-) A-I intron -    22327324 chr9:4729738(-) A-I intron -    22327324 chr9:4730517(-) A-I intron -    22327324 chr9:4730520(-) A-I intron -    22327324 chr9:4730596(-) A-I intron -    22327324 chr9:4735159(-) A-I intron -    22327324 chr9:4735184(-) A-I intron -    22327324 chr9:4736905(-) A-I intron -    22327324 chr9:4736928(-) A-I intron -    21960545   //22327324 chr9:4736973(-) A-I intron -    22327324 chr9:4739345(-) A-I intron -    22327324 chr9:4710815(-) A-I exon 3'UTR    22327324 chr9:4729715(-) A-I intron -    21960545 chr9:4729718(-) A-I intron -    21960545 chr9:4729719(-) A-I intron -    21960545 chr9:4729590(-) A-I intron -    21960545 chr9:4729591(-) A-I intron -    21960545 chr9:4736842(-) A-I intron -    21960545 chr9:4736929(-) A-I intron -    21960545 chr9:4738140(-) A-G intron -    22484847 chr9:4710319(-) A-G exon 3'UTR    22484847 chr9:4710815(-) A-G exon 3'UTR    22484847 chr9:4710877(-) A-G exon 3'UTR    22484847 chr9:4715527(-) A-G intron -    22484847 chr9:4715669(-) A-G intron -    22484847 chr9:4724657(-) A-G intron -    22484847 chr9:4724684(-) A-G intron -    22484847 chr9:4724773(-) A-G intron -    22484847 chr9:4725120(-) A-G intron -    22484847 chr9:4725121(-) A-G intron -    22484847 chr9:4725161(-) A-G intron -    22484847 chr9:4728326(-) A-G intron -    22484847 chr9:4728447(-) A-G intron -    22484847 chr9:4728449(-) A-G intron -    22484847 chr9:4728495(-) A-G intron -    22484847 chr9:4728557(-) A-G intron -    22484847 chr9:4729148(-) A-G intron -    22484847 chr9:4729229(-) A-G intron -    22484847 chr9:4729590(-) A-G intron -    22484847 chr9:4729591(-) A-G intron -    22484847 chr9:4729623(-) A-G intron -    22484847 chr9:4729718(-) A-G intron -    22484847 chr9:4729719(-) A-G intron -    22484847 chr9:4729732(-) A-G intron -    22484847 chr9:4729738(-) A-G intron -    22484847 chr9:4730479(-) A-G intron -    22484847 chr9:4730517(-) A-G intron -    22484847 chr9:4730521(-) A-G intron -    22484847 chr9:4730562(-) A-G intron -    22484847 chr9:4730596(-) A-G intron -    22484847 chr9:4732078(-) A-G intron -    22484847 chr9:4732182(-) A-G intron -    22484847 chr9:4732943(-) A-G intron -    22484847 chr9:4732961(-) A-G intron -    22484847 chr9:4732983(-) A-G intron -    22484847 chr9:4733122(-) A-G intron -    22484847 chr9:4735150(-) A-G intron -    22484847 chr9:4735159(-) A-G intron -    22484847 chr9:4735184(-) A-G intron -    22484847 chr9:4735715(-) A-G intron -    22484847 chr9:4736033(-) A-G intron -    22484847 chr9:4736816(-) A-G intron -    22484847 chr9:4736826(-) A-G intron -    22484847 chr9:4736894(-) A-G intron -    22484847 chr9:4736905(-) A-G intron -    22484847 chr9:4736928(-) A-G intron -    22484847 chr9:4736973(-) A-G intron -    22484847 chr9:4737535(-) A-G intron -    22484847 chr9:4737672(-) A-G intron -    22484847 chr9:4737714(-) A-G intron -    22484847 chr9:4738262(-) A-G intron -    22484847 chr9:4739335(-) A-G intron -    22484847 chr9:4739345(-) A-G intron -    22484847 chr9:4739364(-) A-G intron -    22484847 chr9:4739387(-) A-G intron -    22484847 chr9:4739458(-) A-G intron -    22484847 chr9:4739473(-) A-G intron -    22484847 chr9:4739688(-) A-G intron -    22484847 chr9:4739767(-) A-G intron -    22484847 chr9:4739807(-) A-G intron -    22484847 chr9:4739844(-) A-G intron -    22484847 chr9:4739845(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AK3	chr9:4711794-4711795(-) m6A 3'UTR       27773535 chr9:4711890-4711891(-) m6A 3'UTR       27773535 chr9:4711934-4711935(-) m6A 3'UTR       24981863//27773535 chr9:4712044-4712045(-) m6A 3'UTR       24981863//27773535 chr9:4712469-4712470(-) m6A 3'UTR       22608085 chr9:4712523-4712524(-) m6A 3'UTR       24981863//22608085 chr9:4712533-4712534(-) m6A 3'UTR       24981863//22608085 chr9:4712552-4712553(-) m6A 3'UTR       24981863//22608085 chr9:4712897-4712898(-) m6A 3'UTR       24981863//22608085 chr9:4712936-4712937(-) m6A 3'UTR       24981863//22608085 chr9:4713019-4713020(-) m6A CDS       22608085 chr9:4713058-4713059(-) m6A CDS       22608085 chr9:4740956-4740957(-) m6A CDS//intron       27773536 chr9:4740968-4740969(-) m6A CDS//intron       27773536 chr9:4741206-4741207(-) m6A 5'UTR//intron       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AK3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: AK3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg