Basic Information:

  VIRBase ID:  

VHID00676307

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          IFIT5:  NM_012420     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	IFIT5
miRBase Accession/Entrez ID	MIMAT0010150	24138
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	ISG58//P58//RI58

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IFIT5	chr10:91174518-91174519(+) m6A 5'UTR       24209618//24981863 chr10:91176975-91176976(+) m6A CDS       24209618//24981863//22608085 chr10:91177038-91177039(+) m6A CDS       24209618//24981863//22608085 chr10:91177105-91177106(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr10:91177138-91177139(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr10:91177180-91177181(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr10:91177207-91177208(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr10:91177215-91177216(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr10:91177251-91177252(+) m6A CDS       24209618//24981863//26404942//27773535//22575960//22608085 chr10:91177278-91177279(+) m6A CDS       24209618//24981863//26404942//27773535//22575960//22608085 chr10:91177373-91177374(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr10:91177587-91177588(+) m6A CDS       24981863//22608085 chr10:91177683-91177684(+) m6A CDS       24284625//24209618//24981863//22608085 chr10:91177752-91177753(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr10:91177765-91177766(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr10:91177825-91177826(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91177876-91177877(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91177894-91177895(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91177956-91177957(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:91177983-91177984(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr10:91178031-91178032(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr10:91178061-91178062(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr10:91178080-91178081(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr10:91178178-91178179(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr10:91178200-91178201(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr10:91178236-91178237(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IFIT5	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: IFIT5

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg