Basic Information:

  VIRBase ID:  

VHID00675070

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          SRSF2:  NR_036608     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	SRSF2
miRBase Accession/Entrez ID	MIMAT0010150	6427
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	PR264//SC-35//SC35//SFRS2//SFRS2A//SRp30b

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SRSF2	chr17:74730347-74730348(-) m6A 3'UTR//exon       26404942 chr17:74730685-74730686(-) m6A 3'UTR//exon//intron       26404942 chr17:74730715-74730716(-) m6A 3'UTR//exon//intron       26404942 chr17:74730732-74730733(-) m6A 3'UTR//exon//intron       26404942 chr17:74730750-74730751(-) m6A 3'UTR//exon//intron       26404942 chr17:74730813-74730814(-) m6A 3'UTR//exon//intron       26404942 chr17:74731164-74731165(-) m6A 3'UTR//exon       26404942 chr17:74731196-74731197(-) m6A 3'UTR//exon       26404942 chr17:74731211-74731212(-) m6A 3'UTR//exon       26404942 chr17:74731245-74731246(-) m6A 3'UTR//exon//intron       26404942 chr17:74731261-74731262(-) m6A 3'UTR//exon//intron       26404942 chr17:74731422-74731423(-) m6A 3'UTR//exon//intron       24981863 chr17:74731539-74731540(-) m6A 3'UTR//exon//intron       24981863 chr17:74731563-74731564(-) m6A 3'UTR//exon//intron       24981863 chr17:74732419-74732420(-) Cm CDS//exon       - chr17:74732930-74732931(-) m6A CDS       24981863//27371828//27773536//22575960 chr17:74732952-74732953(-) m6A CDS       24981863//27371828//27773536//22575960 chr17:74733099-74733100(-) m6A CDS       27773536//22575960 chr17:74733186-74733187(-) m6A CDS       27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SRSF2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: SRSF2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg