Basic Information:

  VIRBase ID:  

VHID00674774

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          NF2:  NR_156186     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	NF2
miRBase Accession/Entrez ID	MIMAT0010150	4771
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACN//BANF//merlin-1//SCH

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NF2	chr22:30042856(+) A-I      intronic chr22:30082371(+) A-I      intronic chr22:30075659(+) A-I      intronic chr22:30081634(+) A-I      intronic chr22:30042862(+) A-I      intronic chr22:30042823(+) A-I      intronic chr22:30042837(+) A-I      intronic chr22:30081629(+) A-I      intronic chr22:30081306(+) A-I      intronic chr22:30081226(+) A-I      intronic chr22:30076301(+) A-I      intronic chr22:30076275(+) A-I      intronic chr22:30076248(+) A-I      intronic chr22:30076137(+) A-I      intronic chr22:30075800(+) A-I      intronic chr22:30075654(+) A-I      intronic chr22:30075631(+) A-I      intronic chr22:30075601(+) A-I      intronic chr22:30068406(+) A-I      intronic chr22:30063368(+) A-I      intronic chr22:30063366(+) A-I      intronic chr22:30063353(+) A-I      intronic chr22:30062330(+) A-I      intronic chr22:30049354(+) A-I      intronic chr22:30049042(+) A-I      intronic chr22:30048411(+) A-I      intronic chr22:30048374(+) A-I      intronic chr22:30048358(+) A-I      intronic chr22:30048355(+) A-I      intronic chr22:30046752(+) A-I      intronic chr22:30044686(+) A-I      intronic chr22:30044667(+) A-I      intronic chr22:30042800(+) A-I      intronic chr22:30020358(+) A-I      intronic chr22:30016784(+) A-I      intronic chr22:30016572(+) A-I      intronic chr22:30016479(+) A-I      intronic chr22:30015560(+) A-I      intronic chr22:30015546(+) A-I      intronic chr22:30013178(+) A-I      intronic chr22:30012686(+) A-I      intronic chr22:30012620(+) A-I      intronic chr22:30012611(+) A-I      intronic chr22:30010424(+) A-I      intronic chr22:30010270(+) A-I      intronic chr22:30010269(+) A-I      intronic chr22:30009937(+) A-I      intronic chr22:30009309(+) A-I      intronic chr22:30009304(+) A-I      intronic chr22:30007396(+) A-I      intronic chr22:30007369(+) A-I      intronic chr22:30007239(+) A-I      intronic chr22:30006224(+) A-I      intronic chr22:30004482(+) A-I      intronic chr22:30004457(+) A-I      intronic chr22:30004456(+) A-I      intronic chr22:30004003(+) A-I      intronic chr22:30002937(+) A-I      intronic chr22:30002914(+) A-I      intronic chr22:30002875(+) A-I      intronic chr22:30002874(+) A-I      intronic chr22:30002872(+) A-I      intronic chr22:30002056(+) A-I      intronic chr22:30001534(+) A-I      intronic chr22:30076242(+) A-I      intronic chr22:30016518(+) A-I      intronic chr22:30016088(+) A-I      intronic chr22:30008391(+) A-I      intronic chr22:30002070(+) A-I      intronic chr22:30004150(+) A-I      intronic chr22:30001319(+) A-I      intronic chr22:30075837(+) A-I      intronic chr22:30002863(+) A-I      intronic chr22:30065399(+) A-I      intronic chr22:30008451(+) A-I      intronic chr22:30004041(+) A-I      intronic chr22:30010515(+) A-I      intronic chr22:30002869(+) A-I      intronic chr22:30009866(+) A-I      intronic chr22:30016817(+) A-I      intronic chr22:30012969(+) A-I      intronic chr22:30010678(+) A-I      intronic chr22:30016607(+) A-I      intronic chr22:30082373(+) A-I      intronic chr22:30062550(+) A-I      intronic chr22:30008426(+) A-I      intronic chr22:30075757(+) A-I      intronic chr22:30081236(+) A-I      intronic chr22:30004669(+) A-I      intronic chr22:30048476(+) A-I      intronic chr22:30006145(+) A-I      intronic chr22:30048394(+) A-I      intronic chr22:30008411(+) A-I      intronic chr22:30008830(+) A-I      intronic chr22:30004111(+) A-I      intronic chr22:30012522(+) A-I      intronic chr22:30001337(+) A-I      intronic chr22:30062549(+) A-I      intronic chr22:30044792(+) A-I      intronic chr22:30049271(+) A-I      intronic chr22:30044676(+) A-I      intronic chr22:30009354(+) A-I      intronic chr22:30092269(+) A-I      3'UTR chr22:30092899(+) A-I      3'UTR chr22:30092244(+) A-I      3'UTR chr22:30093068(+) A-I      3'UTR chr22:30092238(+) A-I      3'UTR chr22:30007364(+) A-I      intronic chr22:30008829(+) A-I      intronic chr22:30061699(+) A-I      intronic chr22:30045656(+) A-I      intronic chr22:30012584(+) A-I      intronic chr22:30081536(+) A-I      intronic chr22:30001399(+) A-I      intronic chr22:30004149(+) A-I      intronic chr22:30017509(+) A-I      intronic chr22:30007361(+) A-I      intronic chr22:30008588(+) A-I      intronic chr22:30001271(+) A-I      intronic chr22:30044699(+) A-I      intronic chr22:30049257(+) A-I      intronic chr22:30009849(+) A-I      intronic chr22:30081652(+) A-I      intronic chr22:30002913(+) A-I      intronic chr22:30081509(+) A-I      intronic chr22:30077090(+) A-I      intronic chr22:30009922(+) A-I      intronic chr22:30075600(+) A-I      intronic chr22:30006101(+) A-I      intronic chr22:30044683(+) A-I      intronic chr22:30006228(+) A-I      intronic chr22:30082508(+) A-I      intronic chr22:30007310(+) A-I      intronic chr22:30008437(+) A-I      intronic chr22:30004082(+) A-I      intronic chr22:30048393(+) A-I      intronic chr22:30013018(+) A-I      intronic chr22:30001343(+) A-I      intronic chr22:30007269(+) A-I      intronic chr22:30004090(+) A-I      intronic chr22:30004074(+) A-I      intronic chr22:30001254(+) A-I      intronic chr22:30046789(+) A-I      intronic chr22:30081171(+) A-I      intronic chr22:30062527(+) A-I      intronic chr22:30049226(+) A-I      intronic chr22:30075584(+) A-I      intronic chr22:30081197(+) A-I      intronic chr22:30008534(+) A-I      intronic chr22:30007405(+) A-I      intronic chr22:30011052(+) A-I      intronic chr22:30004083(+) A-I      intronic chr22:30008412(+) A-I      intronic chr22:30081371(+) A-I      intronic chr22:30012517(+) A-I      intronic chr22:30012479(+) A-I      intronic chr22:30011590(+) A-I      intronic chr22:30001356(+) A-I      intronic chr22:30075653(+) A-I      intronic chr22:30002968(+) A-I      intronic chr22:30081674(+) A-I      intronic chr22:30076780(+) A-I      intronic chr22:30045490(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NF2	chr22:30004074(+) A-I intron -    15342557 chr22:30004082(+) A-I intron -    15342557 chr22:30004083(+) A-I intron -    15342557 chr22:30004090(+) A-I intron -    15342557 chr22:30004111(+) A-I intron -    15342557 chr22:30004149(+) A-I intron -    15342557 chr22:30004150(+) A-I intron -    15342557 chr22:30093544(+) A-I intron -    21960545 chr22:30001254(+) A-G intron -    22484847 chr22:30001271(+) A-G intron -    22484847 chr22:30002968(+) A-G intron -    22484847 chr22:30007364(+) A-G intron -    22484847 chr22:30010515(+) A-G intron -    22484847 chr22:30044683(+) A-G intron -    22484847 chr22:30044699(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NF2	chr22:30067911-30067912(+) m1A CDS//intron       26863196 chr22:30069272-30069273(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr22:30069322-30069323(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr22:30070853-30070854(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr22:30074191-30074192(+) m6A CDS//intron       24209618//24981863 chr22:30077475-30077476(+) m6A CDS//intron       24284625//24981863//27773535 chr22:30077482-30077483(+) m6A CDS//intron       24284625//24981863//27773535 chr22:30077502-30077503(+) m6A CDS//intron       24284625//24981863//27773535 chr22:30077507-30077508(+) Am CDS//intron       - chr22:30077518-30077519(+) m6A CDS//intron       24284625//24981863//27773535 chr22:30077546-30077547(+) m6A CDS//intron       24284625//24981863//27773535 chr22:30079028-30079029(+) m6A CDS//intron       24284625 chr22:30090813-30090814(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr22:30090838-30090839(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr22:30090850-30090851(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr22:30090911-30090912(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr22:30090964-30090965(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr22:30091158-30091159(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr22:30091214-30091215(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr22:30091238-30091239(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr22:30091425-30091426(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr22:30091534-30091535(+) m6A 3'UTR       24284625 chr22:30091719-30091720(+) m6A 3'UTR       24284625 chr22:30092198-30092199(+) m6A 3'UTR       24209618 chr22:30093362-30093363(+) m6A 3'UTR       24284625 chr22:30093370-30093371(+) m6A 3'UTR       24284625 chr22:30093524-30093525(+) m6A 3'UTR       - chr22:30093776-30093777(+) m6A 3'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NF2	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: NF2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg