Basic Information:

  VIRBase ID:  

VHID00674589

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          IL16:  NR_148035     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	IL16
miRBase Accession/Entrez ID	MIMAT0010150	3603
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	LCF//NIL16//prIL-16//PRIL16

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IL16	chr15:81529048(+) A-I      intronic chr15:81497510(+) A-I      intronic chr15:81500737(+) A-I      intronic chr15:81571185(+) A-I      NonSyn:Glu->Gly chr15:81512605(+) A-I      intronic chr15:81500945(+) A-I      intronic chr15:81492886(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	IL16	chr15:81571185(+) A-I exon CDS    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IL16	chr15:81585196-81585197(+) m6A 3'UTR//CDS       - chr15:81585215-81585216(+) m6A 3'UTR//CDS       - chr15:81585334-81585335(+) m6A 3'UTR//CDS       - chr15:81589308-81589309(+) m6A 3'UTR//5'UTR//CDS       27371828 chr15:81589351-81589352(+) m6A 3'UTR//5'UTR//CDS//exon       27371828 chr15:81589370-81589371(+) m6A 3'UTR//5'UTR//CDS//exon       27371828 chr15:81591651-81591652(+) m6A CDS//intron       27371828 chr15:81591728-81591729(+) m6A 3'UTR//5'UTR//CDS//intron       27371828 chr15:81591742-81591743(+) m6A 3'UTR//5'UTR//CDS//intron       - chr15:81591774-81591775(+) m6A 3'UTR//CDS//intron       - chr15:81591801-81591802(+) m6A 3'UTR//CDS//intron       - chr15:81591834-81591835(+) m6A 3'UTR//CDS//intron       26404942 chr15:81591861-81591862(+) m6A 3'UTR//CDS//intron       26404942 chr15:81591914-81591915(+) m6A 3'UTR//CDS//exon       26404942//27371828 chr15:81591935-81591936(+) m6A 3'UTR//CDS//exon       26404942//27371828 chr15:81591951-81591952(+) m6A 3'UTR//CDS//exon       26404942//27371828 chr15:81591990-81591991(+) m6A 3'UTR//CDS//exon       26404942//27371828 chr15:81592080-81592081(+) m6A 3'UTR//CDS//exon       - chr15:81592208-81592209(+) m6A 3'UTR//CDS//exon       - chr15:81592249-81592250(+) m6A 3'UTR//CDS//exon       25456834 chr15:81592285-81592286(+) m6A 3'UTR//CDS//exon       25456834 chr15:81592321-81592322(+) m6A 3'UTR//CDS//exon       25456834 chr15:81592413-81592414(+) m6A 3'UTR//CDS       - chr15:81592463-81592464(+) m6A 3'UTR//CDS       - chr15:81592482-81592483(+) m6A 3'UTR//CDS       - chr15:81592616-81592617(+) m6A 3'UTR//CDS       - chr15:81592624-81592625(+) m6A 3'UTR//CDS       - chr15:81598201-81598202(+) m6A exon//intron       - chr15:81598206-81598207(+) m6A exon//intron       - chr15:81598290-81598291(+) m6A 3'UTR//CDS//exon       - chr15:81598344-81598345(+) m6A 3'UTR//CDS//exon       - chr15:81601044-81601045(+) m6A 3'UTR//CDS       22575960 chr15:81601069-81601070(+) m6A 3'UTR//CDS       26404942//22575960 chr15:81601115-81601116(+) m6A 3'UTR//CDS       26404942//22575960 chr15:81601131-81601132(+) m6A 3'UTR//CDS       26404942//22575960 chr15:81601144-81601145(+) m6A 3'UTR       26404942//22575960 chr15:81601282-81601283(+) m6A 3'UTR       - chr15:81601363-81601364(+) m6A 3'UTR       - chr15:81601499-81601500(+) m6A 3'UTR       - chr15:81601615-81601616(+) m6A 3'UTR       25456834//27371828 chr15:81601665-81601666(+) m6A 3'UTR       - chr15:81601939-81601940(+) m6A 3'UTR       - chr15:81602006-81602007(+) m6A 3'UTR       - chr15:81602045-81602046(+) m6A 3'UTR       - chr15:81602066-81602067(+) m6A 3'UTR       - chr15:81602296-81602297(+) m6A 3'UTR       - chr15:81602407-81602408(+) m6A 3'UTR       - chr15:81602520-81602521(+) m6A 3'UTR       - chr15:81602531-81602532(+) m6A 3'UTR       - chr15:81602542-81602543(+) m6A 3'UTR       - chr15:81602548-81602549(+) m6A 3'UTR       - chr15:81602824-81602825(+) m6A 3'UTR       - chr15:81602836-81602837(+) m6A 3'UTR       - chr15:81602842-81602843(+) m6A 3'UTR       - chr15:81602874-81602875(+) m6A 3'UTR       - chr15:81602885-81602886(+) m6A 3'UTR       - chr15:81602898-81602899(+) m6A 3'UTR       - chr15:81603006-81603007(+) m6A 3'UTR       - chr15:81603108-81603109(+) m6A 3'UTR       - chr15:81603122-81603123(+) m6A 3'UTR       - chr15:81603167-81603168(+) m6A 3'UTR       - chr15:81603179-81603180(+) m6A 3'UTR       - chr15:81603202-81603203(+) m6A 3'UTR       - chr15:81603313-81603314(+) m6A 3'UTR       25456834//27371828 chr15:81603416-81603417(+) m6A 3'UTR       - chr15:81603528-81603529(+) m6A 3'UTR       - chr15:81603721-81603722(+) m6A 3'UTR       - chr15:81603787-81603788(+) m6A 3'UTR       25456834 chr15:81603965-81603966(+) m6A 3'UTR       - chr15:81604609-81604610(+) m6A 3'UTR       27371828 chr15:81604739-81604740(+) m6A 3'UTR       25456834//27773536 chr15:81604745-81604746(+) m6A 3'UTR       25456834//27773536 chr15:81604838-81604839(+) m6A 3'UTR       25456834 chr15:81604875-81604876(+) m6A 3'UTR       25456834 chr15:81604907-81604908(+) m6A 3'UTR       25456834 chr15:81604937-81604938(+) m6A 3'UTR       25456834 chr15:81604944-81604945(+) m6A 3'UTR       25456834 chr15:81605149-81605150(+) m6A 3'UTR       - chr15:81605379-81605380(+) m6A 3'UTR       - chr15:81605499-81605500(+) m6A 3'UTR       - chr15:81605640-81605641(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IL16	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: IL16

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg