Basic Information:

  VIRBase ID:  

VHID00674334

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          ETV3:  NM_001145312     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	ETV3
miRBase Accession/Entrez ID	MIMAT0010150	2117
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	METS//PE-1//PE1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ETV3	chr1:157092410-157092411(-) m6A 3'UTR       27773535 chr1:157092424-157092425(-) m6A 3'UTR       24284625//27773535 chr1:157092826-157092827(-) m6A 3'UTR       - chr1:157092892-157092893(-) m6A 3'UTR       - chr1:157093098-157093099(-) m6A 3'UTR       24284625//24981863//27371828 chr1:157093205-157093206(-) m6A 3'UTR       24284625//27371828 chr1:157093344-157093345(-) m6A 3'UTR       24981863//27371828 chr1:157093368-157093369(-) m6A 3'UTR       24981863//27371828 chr1:157093405-157093406(-) m6A 3'UTR       24981863//27371828 chr1:157094181-157094182(-) m6A 3'UTR       24981863 chr1:157094295-157094296(-) m6A 3'UTR       27773535 chr1:157094345-157094346(-) m6A 3'UTR       24981863//27773535 chr1:157094402-157094403(-) m6A 3'UTR       24981863//27773535//22608085 chr1:157094420-157094421(-) m6A 3'UTR       24981863//27773535//22608085 chr1:157094446-157094447(-) m6A 3'UTR       24981863//27773535//22608085 chr1:157094512-157094513(-) m6A 3'UTR       24981863//27773535//22608085 chr1:157094539-157094540(-) m6A 3'UTR       24981863//27773535//22608085 chr1:157094630-157094631(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr1:157094668-157094669(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:157094822-157094823(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:157094842-157094843(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:157094931-157094932(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:157094978-157094979(-) Gm CDS       - chr1:157095022-157095023(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr1:157095107-157095108(-) m6A CDS       24284625//24209618//25456834//27773535//27371828//27773536//22608085 chr1:157095219-157095220(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr1:157095274-157095275(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr1:157095606-157095607(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:157095704-157095705(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:157102958-157102959(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//27773536//22575960//22608085 chr1:157105470-157105471(-) m6A CDS//exon       24284625//24981863//27371828 chr1:157108122-157108123(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536 chr1:157108133-157108134(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536 chr1:157108138-157108139(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536 chr1:157108261-157108262(-) m6A 5'UTR       25456834//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ETV3	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: ETV3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg