Detail Information

Basic Information:


  VIRBase ID:  

VHID00673570

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-3p:           TMEM192:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol jcv-miR-J1-3p TMEM192
miRBase
Accession/Entrez ID		 MIMAT0009148 201931
Organism JC polyomavirus (JCPyV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TMEM192
chr4:166021491(-) A-I      intronic
chr4:166029360(-) A-I      intronic
chr4:166005230(-) A-I      intronic
chr4:166008063(-) A-I      intronic
chr4:166013359(-) A-I      intronic
chr4:166012302(-) A-I      intronic
chr4:166012297(-) A-I      intronic
chr4:166008244(-) A-I      intronic
chr4:166010696(-) A-I      intronic
chr4:166010540(-) A-I      intronic
chr4:166009343(-) A-I      intronic
chr4:166008924(-) A-I      intronic
chr4:166025807(-) A-I      intronic
chr4:166009309(-) A-I      intronic
chr4:166032341(-) A-I      intronic
chr4:166013415(-) A-I      intronic
chr4:166021490(-) A-I      intronic
chr4:166031692(-) A-I      intronic
chr4:166014373(-) A-I      intronic
chr4:166014914(-) A-I      intronic
chr4:166014923(-) A-I      intronic
chr4:166015148(-) A-I      intronic
chr4:166015235(-) A-I      intronic
chr4:166015280(-) A-I      intronic
chr4:166032337(-) A-I      intronic
chr4:166031800(-) A-I      intronic
chr4:166025758(-) A-I      intronic
chr4:166025765(-) A-I      intronic
chr4:166013411(-) A-I      intronic
chr4:166031745(-) A-I      intronic
chr4:166031735(-) A-I      intronic
chr4:166031733(-) A-I      intronic
chr4:166019289(-) A-I      intronic
chr4:166019691(-) A-I      intronic
chr4:166015120(-) A-I      intronic
chr4:166019928(-) A-I      intronic
chr4:166015081(-) A-I      intronic
chr4:166015080(-) A-I      intronic
chr4:166013366(-) A-I      intronic
chr4:166008144(-) A-I      intronic
chr4:166008183(-) A-I      intronic
chr4:166019946(-) A-I      intronic
chr4:166019988(-) A-I      intronic
chr4:166020860(-) A-I      intronic
chr4:166013478(-) A-I      intronic
chr4:166014346(-) A-I      intronic
chr4:166008214(-) A-I      intronic
chr4:166014360(-) A-I      intronic
chr4:166020925(-) A-I      intronic
chr4:166007768(-) A-I      intronic
chr4:166006122(-) A-I      intronic
chr4:166005539(-) A-I      intronic
chr4:166032348(-) A-I      intronic
chr4:166032349(-) A-I      intronic
chr4:166111211(-) A-I      intronic
chr4:166021067(-) A-I      intronic
chr4:166021068(-) A-I      intronic
chr4:166021449(-) A-I      intronic
chr4:166013371(-) A-I      intronic
chr4:166015915(-) A-I      intronic
chr4:166015768(-) A-I      intronic
chr4:166111345(-) A-I      intronic
chr4:166111351(-) A-I      intronic
chr4:166006235(-) A-I      intronic
chr4:166015709(-) A-I      intronic
chr4:166111355(-) A-I      intronic
chr4:166121408(-) A-I      intronic
chr4:166021450(-) A-I      intronic
chr4:166017405(-) A-I      intronic
chr4:166005246(-) A-I      intronic
chr4:166005245(-) A-I      intronic
chr4:166005231(-) A-I      intronic
chr4:165999162(-) A-I      3'UTR
chr4:165999159(-) A-I      3'UTR
chr4:165999149(-) A-I      3'UTR
chr4:165999087(-) A-I      3'UTR
chr4:165998962(-) A-I      3'UTR
chr4:165998960(-) A-I      3'UTR
chr4:165998871(-) A-I      3'UTR
chr4:165998859(-) A-I      3'UTR
chr4:165998811(-) A-I      3'UTR
chr4:165998778(-) A-I      3'UTR
chr4:165998767(-) A-I      3'UTR
chr4:165997992(-) A-I      3'UTR
chr4:165998759(-) A-I      3'UTR
chr4:165998086(-) A-I      3'UTR
chr4:165998030(-) A-I      3'UTR
chr4:165998729(-) A-I      3'UTR
chr4:165998629(-) A-I      3'UTR
chr4:166000167(-) A-I      3'UTR
chr4:165998014(-) A-I      3'UTR
chr4:165998154(-) A-I      3'UTR
chr4:165998132(-) A-I      3'UTR
chr4:165998141(-) A-I      3'UTR
chr4:165998840(-) A-I      3'UTR
chr4:165998835(-) A-I      3'UTR
chr4:165998166(-) A-I      3'UTR
chr4:165997991(-) A-I      3'UTR
chr4:165998026(-) A-I      3'UTR
chr4:165998050(-) A-I      3'UTR
chr4:165998075(-) A-I      3'UTR
chr4:165998098(-) A-I      3'UTR
chr4:165998118(-) A-I      3'UTR
chr4:165998119(-) A-I      3'UTR
chr4:165998122(-) A-I      3'UTR
chr4:165998123(-) A-I      3'UTR
chr4:165998812(-) A-I      3'UTR
chr4:165998769(-) A-I      3'UTR
chr4:165998130(-) A-I      3'UTR
chr4:165998172(-) A-I      3'UTR
chr4:165998177(-) A-I      3'UTR
chr4:165998199(-) A-I      3'UTR
chr4:165998128(-) A-I      3'UTR
chr4:165998129(-) A-I      3'UTR
chr4:165998135(-) A-I      3'UTR
chr4:166000163(-) A-I      3'UTR
chr4:166000146(-) A-I      3'UTR
chr4:166000123(-) A-I      3'UTR
chr4:166000121(-) A-I      3'UTR
chr4:166000124(-) A-I      3'UTR
chr4:165998146(-) A-I      3'UTR
chr4:165998147(-) A-I      3'UTR
chr4:166000118(-) A-I      3'UTR
chr4:166000074(-) A-I      3'UTR
chr4:166000034(-) A-I      3'UTR
chr4:166000009(-) A-I      3'UTR
chr4:166000004(-) A-I      3'UTR
chr4:165999197(-) A-I      3'UTR
chr4:165997976(-) A-I      3'UTR
chr4:165999183(-) A-I      3'UTR
chr4:165997989(-) A-I      3'UTR
chr4:165998748(-) A-I      3'UTR
chr4:166025775(-) A-I      intronic
chr4:166015660(-) A-I      intronic
chr4:166008945(-) A-I      intronic
chr4:166020844(-) A-I      intronic
chr4:166017315(-) A-I      intronic
chr4:166032357(-) A-I      intronic
chr4:166012417(-) A-I      intronic
chr4:166012250(-) A-I      intronic
chr4:166009229(-) A-I      intronic
chr4:166017303(-) A-I      intronic
chr4:166122069(-) A-I      intronic
chr4:166060091(-) A-I      intronic
chr4:166032518(-) A-I      intronic
chr4:166020931(-) A-I      intronic
chr4:166020081(-) A-I      intronic
chr4:166020989(-) A-I      intronic
chr4:166019736(-) A-I      intronic
chr4:166015647(-) A-I      intronic
chr4:166042814(-) A-I      intronic
chr4:166019064(-) A-I      intronic
chr4:166012004(-) A-I      intronic
chr4:166042609(-) A-I      intronic
chr4:166009092(-) A-I      intronic
chr4:166019111(-) A-I      intronic
chr4:166018905(-) A-I      intronic
chr4:166094716(-) A-I      intronic
chr4:166028341(-) A-I      intronic
chr4:166029545(-) A-I      intronic
chr4:166019663(-) A-I      intronic
chr4:166018918(-) A-I      intronic
chr4:166008009(-) A-I      intronic
chr4:166011993(-) A-I      intronic
chr4:166021014(-) A-I      intronic
chr4:166016004(-) A-I      intronic
chr4:166005912(-) A-I      intronic
chr4:166019362(-) A-I      intronic
chr4:165998020(-) A-I      3'UTR
chr4:165999143(-) A-I      3'UTR
chr4:166000148(-) A-I      3'UTR
chr4:165999188(-) A-I      3'UTR
chr4:166000106(-) A-I      3'UTR
chr4:165998131(-) A-I      3'UTR
chr4:165998775(-) A-I      3'UTR
chr4:165998950(-) A-I      3'UTR
chr4:165998785(-) A-I      3'UTR
chr4:165998773(-) A-I      3'UTR
chr4:165998655(-) A-I      3'UTR
chr4:165997983(-) A-I      3'UTR
chr4:166000139(-) A-I      3'UTR
chr4:165998692(-) A-I      3'UTR
chr4:165998802(-) A-I      3'UTR
chr4:165998019(-) A-I      3'UTR
chr4:165999166(-) A-I      3'UTR
chr4:165998011(-) A-I      3'UTR
chr4:165998694(-) A-I      3'UTR
chr4:166000080(-) A-I      3'UTR
chr4:166000138(-) A-I      3'UTR
chr4:165998180(-) A-I      3'UTR
chr4:166000014(-) A-I      3'UTR
chr4:165999093(-) A-I      3'UTR
chr4:165998171(-) A-I      3'UTR
chr4:165998046(-) A-I      3'UTR
chr4:165998734(-) A-I      3'UTR
chr4:166000053(-) A-I      3'UTR
chr4:165998788(-) A-I      3'UTR
chr4:165998925(-) A-I      3'UTR
chr4:165998642(-) A-I      3'UTR
chr4:166000070(-) A-I      3'UTR
chr4:165998797(-) A-I      3'UTR
chr4:165998082(-) A-I      3'UTR
chr4:165998815(-) A-I      3'UTR
chr4:165998226(-) A-I      3'UTR
chr4:165998654(-) A-I      3'UTR
chr4:165998225(-) A-I      3'UTR
chr4:165998043(-) A-I      3'UTR
chr4:165998148(-) A-I      3'UTR
chr4:165998152(-) A-I      3'UTR
chr4:165998065(-) A-I      3'UTR
chr4:165998850(-) A-I      3'UTR
chr4:165998749(-) A-I      3'UTR
chr4:165997966(-) A-I      3'UTR
chr4:165998156(-) A-I      3'UTR
chr4:165998209(-) A-I      3'UTR
chr4:165999172(-) A-I      3'UTR
chr4:165998717(-) A-I      3'UTR
chr4:165998039(-) A-I      3'UTR
chr4:165998078(-) A-I      3'UTR
chr4:165998958(-) A-I      3'UTR
chr4:165999994(-) A-I      3'UTR
chr4:165999180(-) A-I      3'UTR
chr4:165998853(-) A-I      3'UTR
chr4:166015090(-) A-I      intronic
chr4:166019640(-) A-I      intronic
chr4:166007711(-) A-I      intronic
chr4:166016037(-) A-I      intronic
chr4:166102223(-) A-I      intronic
chr4:166016002(-) A-I      intronic
chr4:166015882(-) A-I      intronic
chr4:166006378(-) A-I      intronic
chr4:166055003(-) A-I      intronic
chr4:166008099(-) A-I      intronic
chr4:166019176(-) A-I      intronic
chr4:166006381(-) A-I      intronic
chr4:166019441(-) A-I      intronic
chr4:166020399(-) A-I      intronic
chr4:166021316(-) A-I      intronic
chr4:166025768(-) A-I      intronic
chr4:166009161(-) A-I      intronic
chr4:166014334(-) A-I      intronic
chr4:166020403(-) A-I      intronic
chr4:166010763(-) A-I      intronic
chr4:166008253(-) A-I      intronic
chr4:166019550(-) A-I      intronic
chr4:166020979(-) A-I      intronic
chr4:166017067(-) A-I      intronic
chr4:166015130(-) A-I      intronic
chr4:166008021(-) A-I      intronic
chr4:166028314(-) A-I      intronic
chr4:166010071(-) A-I      intronic
chr4:166004066(-) A-I      intronic
chr4:166017394(-) A-I      intronic
chr4:166007639(-) A-I      intronic
chr4:166015881(-) A-I      intronic
chr4:166021006(-) A-I      intronic
chr4:166011994(-) A-I      intronic
chr4:166122013(-) A-I      intronic
chr4:166007738(-) A-I      intronic
chr4:166010747(-) A-I      intronic
chr4:166032519(-) A-I      intronic
chr4:166020417(-) A-I      intronic
chr4:166021018(-) A-I      intronic
chr4:166011948(-) A-I      intronic
chr4:166011934(-) A-I      intronic
chr4:166025193(-) A-I      intronic
chr4:166019552(-) A-I      intronic
chr4:166021100(-) A-I      intronic
chr4:166014042(-) A-I      intronic
chr4:166015870(-) A-I      intronic
chr4:166020511(-) A-I      intronic
chr4:166055004(-) A-I      intronic
chr4:166037026(-) A-I      intronic
chr4:166066993(-) A-I      intronic
chr4:166011909(-) A-I      intronic
chr4:166018863(-) A-I      intronic
chr4:166017397(-) A-I      intronic
chr4:166030812(-) A-I      intronic
chr4:166028188(-) A-I      intronic
chr4:166017167(-) A-I      intronic
chr4:166024688(-) A-I      intronic
chr4:166024838(-) A-I      intronic
chr4:166019053(-) A-I      intronic
chr4:166015644(-) A-I      intronic
chr4:166018858(-) A-I      intronic
chr4:166020929(-) A-I      intronic
chr4:166009164(-) A-I      intronic
chr4:166019097(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TMEM192
chr4:165998714(-) A-I exon 3'UTR    15258596
chr4:165998773(-) A-I exon 3'UTR    15258596
chr4:165998775(-) A-I exon 3'UTR    15258596
chr4:165998785(-) A-I exon 3'UTR    15258596
chr4:165998802(-) A-I exon 3'UTR    15258596
chr4:165999938(-) A-I exon 3'UTR    15258596
chr4:166000014(-) A-I exon 3'UTR    15342557
chr4:166000053(-) A-I exon 3'UTR    15342557
chr4:166000080(-) A-I exon 3'UTR    15342557
chr4:166000122(-) A-I exon 3'UTR    15342557
chr4:166000139(-) A-I exon 3'UTR    15258596
chr4:166000148(-) A-I exon 3'UTR    15342557   //15258596
chr4:166021939(-) A-I exon CDS    15342557
chr4:165998019(-) A-I exon 3'UTR    22327324
chr4:165998078(-) A-I exon 3'UTR    22327324
chr4:165998642(-) A-I exon 3'UTR    22327324
chr4:165998654(-) A-I exon 3'UTR    22327324
chr4:165999189(-) A-I exon 3'UTR    22327324
chr4:165998642(-) A-G exon 3'UTR    21725310   //22484847
chr4:165998785(-) A-G exon 3'UTR    21725310   //22484847
chr4:165998958(-) A-G exon 3'UTR    21725310   //22484847
chr4:166000148(-) A-G exon 3'UTR    21725310   //22484847
chr4:165997983(-) A-G exon 3'UTR    22484847
chr4:165998019(-) A-G exon 3'UTR    22484847
chr4:165998039(-) A-G exon 3'UTR    22484847
chr4:165998078(-) A-G exon 3'UTR    22484847
chr4:165998082(-) A-G exon 3'UTR    22484847
chr4:165998091(-) A-G exon 3'UTR    22484847
chr4:165998092(-) A-G exon 3'UTR    22484847
chr4:165998226(-) A-G exon 3'UTR    22484847
chr4:165998654(-) A-G exon 3'UTR    22484847
chr4:165998655(-) A-G exon 3'UTR    22484847
chr4:165998714(-) A-G exon 3'UTR    22484847
chr4:165998717(-) A-G exon 3'UTR    22484847
chr4:165998853(-) A-G exon 3'UTR    22484847
chr4:165998856(-) A-G exon 3'UTR    22484847
chr4:165998950(-) A-G exon 3'UTR    22484847
chr4:165999143(-) A-G exon 3'UTR    22484847
chr4:165999188(-) A-G exon 3'UTR    22484847
chr4:165999189(-) A-G exon 3'UTR    22484847
chr4:166000106(-) A-G exon 3'UTR    22484847
chr4:166000139(-) A-G exon 3'UTR    22484847
chr4:166008253(-) A-G intron -    22484847
chr4:166012004(-) A-G intron -    22484847
chr4:166012062(-) G-T intron -    22484847
chr4:166012417(-) A-G intron -    22484847
chr4:166015130(-) A-G intron -    22484847
chr4:166015881(-) A-G intron -    22484847
chr4:166017167(-) A-G intron -    22484847
chr4:166017394(-) A-G intron -    22484847
chr4:166017443(-) A-G intron -    22484847
chr4:166020928(-) A-G intron -    22484847
chr4:166020929(-) A-G intron -    22484847
chr4:166021423(-) A-G intron -    22484847
chr4:166025228(-) A-G intron -    22484847
chr4:166031818(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TMEM192
chr4:165997560-165997561(-) m6A 3'UTR       24981863//27773535
chr4:165997601-165997602(-) m6A 3'UTR       24981863//27773535
chr4:165997619-165997620(-) m6A 3'UTR       24981863//27773535
chr4:165997638-165997639(-) m6A 3'UTR       24981863//27773535
chr4:165997700-165997701(-) m6A 3'UTR       24981863//27773535
chr4:165997705-165997706(-) m6A 3'UTR       24981863//27773535
chr4:165997810-165997811(-) m6A 3'UTR       24981863//27773535
chr4:165997860-165997861(-) m6A 3'UTR       24981863//27773535
chr4:165997916-165997917(-) m6A 3'UTR       24981863//27773535
chr4:165997932-165997933(-) m6A 3'UTR       24981863//27773535
chr4:165997937-165997938(-) m6A 3'UTR       24981863//27773535
chr4:165997949-165997950(-) m6A 3'UTR       24981863//27773535
chr4:165997980-165997981(-) m6A 3'UTR       24981863//27773535
chr4:165998049-165998050(-) m6A 3'UTR       24981863
chr4:165999952-165999953(-) m6A 3'UTR       24981863
chr4:165999968-165999969(-) m6A 3'UTR       24981863
chr4:166000037-166000038(-) m6A 3'UTR       24981863
chr4:166000137-166000138(-) m6A 3'UTR       27773535
chr4:166000160-166000161(-) m6A 3'UTR       27773535
chr4:166000261-166000262(-) m6A 3'UTR       27773535
chr4:166000488-166000489(-) m6A 3'UTR       27773535
chr4:166000526-166000527(-) m6A 3'UTR       24981863//27773535
chr4:166000683-166000684(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr4:166000726-166000727(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr4:166000759-166000760(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr4:166000775-166000776(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr4:166000837-166000838(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr4:166000906-166000907(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:166006747-166006748(-) m6A CDS       27773535
chr4:166006811-166006812(-) m6A CDS       27773535
chr4:166024158-166024159(-) m6A 5'UTR//CDS       24981863
chr4:166032803-166032804(-) m6A 5'UTR//intron       24209618//25456834//24981863//27371828//27773536//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate jcv-miR-J1-3p
Nucleus PML tissue     32324824
TMEM192
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: jcv-miR-J1-3p
Interactor2: TMEM192

Evidence Support:


Prediction-Evidence cRep//PITA//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...