Basic Information:

  VIRBase ID:  

VHID00673137

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-3p:  MIMAT0009148          TMPRSS13:  NM_001244995     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-3p	TMPRSS13
miRBase Accession/Entrez ID	MIMAT0009148	84000
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MSP//MSPL//MSPS//TMPRSS11

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMPRSS13	chr11:117793106(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMPRSS13	chr11:117771432-117771433(-) m6A 3'UTR       25456834//27371828 chr11:117771507-117771508(-) m6A 3'UTR       25456834 chr11:117771959-117771960(-) m6A 3'UTR       25456834 chr11:117772000-117772001(-) m6A 3'UTR       25456834//27371828 chr11:117772422-117772423(-) m6A 3'UTR       25456834 chr11:117772480-117772481(-) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-3p	Nucleus PML tissue     32324824
	TMPRSS13	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-3p
Interactor2: TMPRSS13

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg