Basic Information:

  VIRBase ID:  

VHID00672443

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-3p:  MIMAT0009148          DESI1:  NM_015704     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-3p	DESI1
miRBase Accession/Entrez ID	MIMAT0009148	27351
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	D15Wsu75e//DeSI-1//DESI2//DJ347H13.4//FAM152B//POST//PPPDE2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DESI1	chr22:42007202(-) A-I      intronic chr22:42007657(-) A-I      intronic chr22:42007665(-) A-I      intronic chr22:42007316(-) A-I      intronic chr22:42007210(-) A-I      intronic chr22:41995917(-) A-I      3'UTR chr22:41997846(-) A-I      intronic chr22:42010282(-) A-I      intronic chr22:42007330(-) A-I      intronic chr22:42007180(-) A-I      intronic chr22:42007410(-) A-I      intronic chr22:42010235(-) A-I      intronic chr22:42010266(-) A-I      intronic chr22:42010290(-) A-I      intronic chr22:42010313(-) A-I      intronic chr22:42015024(-) A-I      intronic chr22:42015017(-) A-I      intronic chr22:42014968(-) A-I      intronic chr22:42014245(-) A-I      intronic chr22:42014956(-) A-I      intronic chr22:42011058(-) A-I      intronic chr22:42010152(-) A-I      intronic chr22:42011068(-) A-I      intronic chr22:42011212(-) A-I      intronic chr22:42011368(-) A-I      intronic chr22:42008731(-) A-I      intronic chr22:42002172(-) A-I      intronic chr22:42008430(-) A-I      intronic chr22:42012021(-) A-I      intronic chr22:42012044(-) A-I      intronic chr22:42014132(-) A-I      intronic chr22:42014212(-) A-I      intronic chr22:42014904(-) A-I      intronic chr22:42014305(-) A-I      intronic chr22:42014291(-) A-I      intronic chr22:42008397(-) A-I      intronic chr22:42000523(-) A-I      intronic chr22:42000508(-) A-I      intronic chr22:42011060(-) A-I      intronic chr22:42000469(-) A-I      intronic chr22:42000421(-) A-I      intronic chr22:42008268(-) A-I      intronic chr22:42002578(-) A-I      intronic chr22:42002659(-) A-I      intronic chr22:42002666(-) A-I      intronic chr22:42005125(-) A-I      intronic chr22:42005577(-) A-I      intronic chr22:42005719(-) A-I      intronic chr22:42005787(-) A-I      intronic chr22:42005915(-) A-I      intronic chr22:42005972(-) A-I      intronic chr22:42005997(-) A-I      intronic chr22:42006021(-) A-I      intronic chr22:42006022(-) A-I      intronic chr22:42008256(-) A-I      intronic chr22:42006038(-) A-I      intronic chr22:42006045(-) A-I      intronic chr22:42006203(-) A-I      intronic chr22:42006283(-) A-I      intronic chr22:42006296(-) A-I      intronic chr22:42006300(-) A-I      intronic chr22:42006326(-) A-I      intronic chr22:42006380(-) A-I      intronic chr22:42007816(-) A-I      intronic chr22:42006714(-) A-I      intronic chr22:42006729(-) A-I      intronic chr22:42006742(-) A-I      intronic chr22:42006790(-) A-I      intronic chr22:42006794(-) A-I      intronic chr22:42006825(-) A-I      intronic chr22:42007314(-) A-I      intronic chr22:42006037(-) A-I      intronic chr22:42007815(-) A-I      intronic chr22:42007721(-) A-I      intronic chr22:42007708(-) A-I      intronic chr22:42007694(-) A-I      intronic chr22:42007379(-) A-I      intronic chr22:42007364(-) A-I      intronic chr22:41997905(-) A-I      intronic chr22:41997864(-) A-I      intronic chr22:41997833(-) A-I      intronic chr22:42010220(-) A-I      intronic chr22:42014267(-) A-I      intronic chr22:41997814(-) A-I      intronic chr22:41997803(-) A-I      intronic chr22:42010208(-) A-I      intronic chr22:42010188(-) A-I      intronic chr22:42010178(-) A-I      intronic chr22:42007355(-) A-I      intronic chr22:41995670(-) A-I      3'UTR chr22:41996124(-) A-I      3'UTR chr22:41996034(-) A-I      3'UTR chr22:41995649(-) A-I      3'UTR chr22:41995766(-) A-I      3'UTR chr22:41996040(-) A-I      3'UTR chr22:41995740(-) A-I      3'UTR chr22:41996035(-) A-I      3'UTR chr22:41995767(-) A-I      3'UTR chr22:41996195(-) A-I      3'UTR chr22:41995790(-) A-I      3'UTR chr22:41995639(-) A-I      3'UTR chr22:41995645(-) A-I      3'UTR chr22:41995616(-) A-I      3'UTR chr22:41996020(-) A-I      3'UTR chr22:41996192(-) A-I      3'UTR chr22:41996059(-) A-I      3'UTR chr22:41995805(-) A-I      3'UTR chr22:41995782(-) A-I      3'UTR chr22:41995601(-) A-I      3'UTR chr22:41995685(-) A-I      3'UTR chr22:41995669(-) A-I      3'UTR chr22:41996015(-) A-I      3'UTR chr22:41995731(-) A-I      3'UTR chr22:41995593(-) A-I      3'UTR chr22:42006002(-) A-I      intronic chr22:42005672(-) A-I      intronic chr22:42010544(-) A-I      intronic chr22:42005936(-) A-I      intronic chr22:42014810(-) A-I      intronic chr22:42005173(-) A-I      intronic chr22:42010563(-) A-I      intronic chr22:42010792(-) A-I      intronic chr22:42005142(-) A-I      intronic chr22:42006141(-) A-I      intronic chr22:42006384(-) A-I      intronic chr22:42007664(-) A-I      intronic chr22:42008463(-) A-I      intronic chr22:42007239(-) A-I      intronic chr22:42006261(-) A-I      intronic chr22:42011338(-) A-I      intronic chr22:42002638(-) A-I      intronic chr22:42007191(-) A-I      intronic chr22:42007735(-) A-I      intronic chr22:41997987(-) A-I      intronic chr22:42007881(-) A-I      intronic chr22:41997855(-) A-I      intronic chr22:42007325(-) A-I      intronic chr22:42012200(-) A-I      intronic chr22:42015005(-) A-I      intronic chr22:42005580(-) A-I      intronic chr22:42005048(-) A-I      intronic chr22:42007262(-) A-I      intronic chr22:42000378(-) A-I      intronic chr22:42005716(-) A-I      intronic chr22:42008714(-) A-I      intronic chr22:41997910(-) A-I      intronic chr22:42007176(-) A-I      intronic chr22:42005848(-) A-I      intronic chr22:42012165(-) A-I      intronic chr22:42007301(-) A-I      intronic chr22:42000417(-) A-I      intronic chr22:42002596(-) A-I      intronic chr22:42005084(-) A-I      intronic chr22:41997882(-) A-I      intronic chr22:42012203(-) A-I      intronic chr22:42010726(-) A-I      intronic chr22:42005183(-) A-I      intronic chr22:41995586(-) A-I      3'UTR chr22:41996161(-) A-I      3'UTR chr22:41995732(-) A-I      3'UTR chr22:41996164(-) A-I      3'UTR chr22:41996071(-) A-I      3'UTR chr22:41995631(-) A-I      3'UTR chr22:41995672(-) A-I      3'UTR chr22:41995624(-) A-I      3'UTR chr22:41996157(-) A-I      3'UTR chr22:41995636(-) A-I      3'UTR chr22:41995940(-) A-I      3'UTR chr22:41995844(-) A-I      3'UTR chr22:41996026(-) A-I      3'UTR chr22:41995836(-) A-I      3'UTR chr22:41995696(-) A-I      3'UTR chr22:41995692(-) A-I      3'UTR chr22:41995742(-) A-I      3'UTR chr22:41995926(-) A-I      3'UTR chr22:41995597(-) A-I      3'UTR chr22:41996181(-) A-I      3'UTR chr22:41996175(-) A-I      3'UTR chr22:41996145(-) A-I      3'UTR chr22:41996121(-) A-I      3'UTR chr22:41996017(-) A-I      3'UTR chr22:41995939(-) A-I      3'UTR chr22:41995957(-) A-I      3'UTR chr22:41995835(-) A-I      3'UTR chr22:41995679(-) A-I      3'UTR chr22:41995733(-) A-I      3'UTR chr22:41996100(-) A-I      3'UTR chr22:41995675(-) A-I      3'UTR chr22:41995728(-) A-I      3'UTR chr22:41995720(-) A-I      3'UTR chr22:41996083(-) A-I      3'UTR chr22:41996061(-) A-I      3'UTR chr22:41995599(-) A-I      3'UTR chr22:41995621(-) A-I      3'UTR chr22:41995745(-) A-I      3'UTR chr22:41995781(-) A-I      3'UTR chr22:42006200(-) A-I      intronic chr22:42005008(-) A-I      intronic chr22:42002613(-) A-I      intronic chr22:42005192(-) A-I      intronic chr22:42012083(-) A-I      intronic chr22:42005141(-) A-I      intronic chr22:42007145(-) A-I      intronic chr22:42002533(-) A-I      intronic chr22:42005128(-) A-I      intronic chr22:41997889(-) A-I      intronic chr22:42006186(-) A-I      intronic chr22:42007274(-) A-I      intronic chr22:42005630(-) A-I      intronic chr22:42011244(-) A-I      intronic chr22:42007868(-) A-I      intronic chr22:42010753(-) A-I      intronic chr22:42000437(-) A-I      intronic chr22:42005083(-) A-I      intronic chr22:42002610(-) A-I      intronic chr22:42002691(-) A-I      intronic chr22:42010113(-) A-I      intronic chr22:42005725(-) A-I      intronic chr22:42005726(-) A-I      intronic chr22:42005629(-) A-I      intronic chr22:42000426(-) A-I      intronic chr22:42005715(-) A-I      intronic chr22:42005021(-) A-I      intronic chr22:42014201(-) A-I      intronic chr22:42002284(-) A-I      intronic chr22:42011422(-) A-I      intronic chr22:42006320(-) A-I      intronic chr22:42002606(-) A-I      intronic chr22:42014812(-) A-I      intronic chr22:42005606(-) A-I      intronic chr22:42010561(-) A-I      intronic chr22:42007725(-) A-I      intronic chr22:42010793(-) A-I      intronic chr22:42002265(-) A-I      intronic chr22:42010137(-) A-I      intronic chr22:42008672(-) A-I      intronic chr22:42002776(-) A-I      intronic chr22:42010839(-) A-I      intronic chr22:42005847(-) A-I      intronic chr22:42014899(-) A-I      intronic chr22:42007699(-) A-I      intronic chr22:42007867(-) A-I      intronic chr22:42005662(-) A-I      intronic chr22:42007319(-) A-I      intronic chr22:42006307(-) A-I      intronic chr22:42006350(-) A-I      intronic chr22:42005218(-) A-I      intronic chr22:42012099(-) A-I      intronic chr22:42014879(-) A-I      intronic chr22:42005962(-) A-I      intronic chr22:42005013(-) A-I      intronic chr22:42011177(-) A-I      intronic chr22:42012147(-) A-I      intronic chr22:42005835(-) A-I      intronic chr22:42005219(-) A-I      intronic chr22:42002291(-) A-I      intronic chr22:42012234(-) A-I      intronic chr22:42002274(-) A-I      intronic chr22:42000346(-) A-I      intronic chr22:42007249(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DESI1	chr22:42000426(-) A-I intron -    22327324 chr22:42008714(-) A-I intron -    22327324 chr22:42008720(-) A-I intron -    22327324 chr22:41995675(-) A-I exon 3'UTR    22327324 chr22:41995742(-) A-I exon 3'UTR    22327324 chr22:41996011(-) A-I exon 3'UTR    22327324 chr22:41996017(-) A-I exon 3'UTR    22327324 chr22:41996026(-) A-I exon 3'UTR    22327324 chr22:41996071(-) A-I exon 3'UTR    22327324 chr22:42002879(-) A-C intron -    22484847 chr22:42009185(-) A-G intron -    22484847 chr22:41995597(-) A-G exon 3'UTR    22484847 chr22:41995599(-) A-G exon 3'UTR    22484847 chr22:41995624(-) A-G exon 3'UTR    22484847 chr22:41995631(-) A-G exon 3'UTR    22484847 chr22:41995636(-) A-G exon 3'UTR    22484847 chr22:41995660(-) A-G exon 3'UTR    22484847 chr22:41995672(-) A-G exon 3'UTR    22484847 chr22:41995675(-) A-G exon 3'UTR    22484847 chr22:41995679(-) A-G exon 3'UTR    22484847 chr22:41995692(-) A-G exon 3'UTR    22484847 chr22:41995835(-) A-G exon 3'UTR    22484847 chr22:41995926(-) A-G exon 3'UTR    22484847 chr22:41995957(-) A-G exon 3'UTR    22484847 chr22:41996061(-) A-G exon 3'UTR    22484847 chr22:41996071(-) A-G exon 3'UTR    22484847 chr22:41996101(-) A-G exon 3'UTR    22484847 chr22:41996121(-) A-G exon 3'UTR    22484847 chr22:41996157(-) A-G exon 3'UTR    22484847 chr22:41996161(-) A-G exon 3'UTR    22484847 chr22:41996164(-) A-G exon 3'UTR    22484847 chr22:41997889(-) A-G intron -    22484847 chr22:42000346(-) A-G intron -    22484847 chr22:42000378(-) A-G intron -    22484847 chr22:42000388(-) A-G intron -    22484847 chr22:42000426(-) A-G intron -    22484847 chr22:42000427(-) A-G intron -    22484847 chr22:42000437(-) A-G intron -    22484847 chr22:42002284(-) A-G intron -    22484847 chr22:42002596(-) A-G intron -    22484847 chr22:42002613(-) A-G intron -    22484847 chr22:42005008(-) A-G intron -    22484847 chr22:42005013(-) A-G intron -    22484847 chr22:42005031(-) A-G intron -    22484847 chr22:42005629(-) A-G intron -    22484847 chr22:42005725(-) A-G intron -    22484847 chr22:42005762(-) A-G intron -    22484847 chr22:42005847(-) A-G intron -    22484847 chr22:42006384(-) A-G intron -    22484847 chr22:42007699(-) A-G intron -    22484847 chr22:42007735(-) A-G intron -    22484847 chr22:42008672(-) A-G intron -    22484847 chr22:42008714(-) A-G intron -    22484847 chr22:42008720(-) A-G intron -    22484847 chr22:42010221(-) A-G intron -    22484847 chr22:42010544(-) A-G intron -    22484847 chr22:42010574(-) A-G intron -    22484847 chr22:42010577(-) A-G intron -    22484847 chr22:42010788(-) A-G intron -    22484847 chr22:42010792(-) A-G intron -    22484847 chr22:42012234(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DESI1	chr22:41994381-41994382(-) m6A 3'UTR       - chr22:41994536-41994537(-) m6A 3'UTR       27773535 chr22:41994883-41994884(-) m6A 3'UTR       24284625//22608085 chr22:41994893-41994894(-) m6A 3'UTR       24284625//22608085 chr22:41994940-41994941(-) m6A 3'UTR       24284625//24981863//22608085 chr22:41994982-41994983(-) m6A 3'UTR       24284625//24981863//27371828//22608085 chr22:41995208-41995209(-) m6A 3'UTR       24284625//24981863//22608085 chr22:41995287-41995288(-) m6A 3'UTR       24284625//24981863//22608085 chr22:41995330-41995331(-) m6A 3'UTR       - chr22:41996415-41996416(-) m6A 3'UTR       24284625//24981863 chr22:41996481-41996482(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr22:41996592-41996593(-) m6A 3'UTR       24284625//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr22:41996626-41996627(-) m6A 3'UTR       24284625//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr22:41996650-41996651(-) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr22:41996688-41996689(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr22:41996706-41996707(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr22:41996743-41996744(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr22:41996757-41996758(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr22:41996797-41996798(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr22:41996921-41996922(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr22:41996926-41996927(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr22:41996942-41996943(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr22:41996961-41996962(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr22:41997046-41997047(-) m6A 3'UTR//exon       24284625//24981863//26404942//27773535//22608085 chr22:41997051-41997052(-) m6A 3'UTR//exon       24284625//24981863//26404942//27773535//22608085 chr22:41997085-41997086(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535 chr22:41997095-41997096(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535 chr22:41997118-41997119(-) m6A CDS//exon       24284625//25456834//24981863//27773535 chr22:41997161-41997162(-) m6A CDS//exon       24284625//25456834//24981863//27773535 chr22:41997184-41997185(-) m6A CDS//exon       24284625//25456834//24981863 chr22:41998443-41998444(-) m6A exon//intron       24981863//27773535//22608085 chr22:41998448-41998449(-) m6A exon//intron       24981863//27773535//22608085 chr22:41998554-41998555(-) m6A exon//intron       24284625//24981863//27773535//22608085 chr22:41998593-41998594(-) m6A exon//intron       24284625//24981863//27773535//22608085 chr22:41998670-41998671(-) m6A exon//intron       24284625//24981863//27773535//22608085 chr22:41998756-41998757(-) m6A exon//intron       27773535 chr22:41999026-41999027(-) m6A exon//intron       27773535 chr22:41999032-41999033(-) m6A exon//intron       27773535 chr22:41999066-41999067(-) m6A exon//intron       27773535 chr22:41999286-41999287(-) m6A CDS//exon       27773535 chr22:41999360-41999361(-) m6A CDS//exon       27773535 chr22:42000122-42000123(-) Tm CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-3p	Nucleus PML tissue     32324824
	DESI1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-3p
Interactor2: DESI1

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg