Basic Information:

  VIRBase ID:  

VHID00672332

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-3p:  MIMAT0009148          MTREX:  NM_015360     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-3p	MTREX
miRBase Accession/Entrez ID	MIMAT0009148	23517
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Dob1//fSAP118//KIAA0052//Mtr4//SKIV2L2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MTREX	chr5:54620393(+) A-I      ncRNA chr5:54622183(+) A-I      intronic chr5:54622178(+) A-I      intronic chr5:54622049(+) A-I      intronic chr5:54609272(+) A-I      intronic chr5:54606751(+) A-I      intronic chr5:54698800(+) A-I      intronic chr5:54621289(+) A-I      intronic chr5:54698770(+) A-I      intronic chr5:54698775(+) A-I      intronic chr5:54698778(+) A-I      intronic chr5:54698786(+) A-I      intronic chr5:54698791(+) A-I      intronic chr5:54698792(+) A-I      intronic chr5:54665961(+) A-I      intronic chr5:54665934(+) A-I      intronic chr5:54665891(+) A-I      intronic chr5:54665888(+) A-I      intronic chr5:54664115(+) A-I      intronic chr5:54664101(+) A-I      intronic chr5:54696943(+) A-I      intronic chr5:54714789(+) A-I      intronic chr5:54714811(+) A-I      intronic chr5:54664067(+) A-I      intronic chr5:54647799(+) A-I      intronic chr5:54647252(+) A-I      intronic chr5:54665979(+) A-I      intronic chr5:54665985(+) A-I      intronic chr5:54669853(+) A-I      intronic chr5:54669858(+) A-I      intronic chr5:54669979(+) A-I      intronic chr5:54670276(+) A-I      intronic chr5:54695433(+) A-I      intronic chr5:54695497(+) A-I      intronic chr5:54695522(+) A-I      intronic chr5:54696942(+) A-I      intronic chr5:54696962(+) A-I      intronic chr5:54705787(+) A-I      intronic chr5:54705781(+) A-I      intronic chr5:54700761(+) A-I      intronic chr5:54700731(+) A-I      intronic chr5:54696963(+) A-I      intronic chr5:54700730(+) A-I      intronic chr5:54698819(+) A-I      intronic chr5:54698816(+) A-I      intronic chr5:54699011(+) A-I      intronic chr5:54700718(+) A-I      intronic chr5:54703859(+) A-I      intronic chr5:54705810(+) A-I      intronic chr5:54621239(+) A-I      intronic chr5:54621240(+) A-I      intronic chr5:54621285(+) A-I      intronic chr5:54713900(+) A-I      intronic chr5:54714873(+) A-I      intronic chr5:54609078(+) A-I      intronic chr5:54609036(+) A-I      intronic chr5:54670311(+) A-I      intronic chr5:54698776(+) A-I      intronic chr5:54700877(+) A-I      intronic chr5:54670035(+) A-I      intronic chr5:54705765(+) A-I      intronic chr5:54606739(+) A-I      intronic chr5:54663193(+) A-I      intronic chr5:54704935(+) A-I      intronic chr5:54704842(+) A-I      intronic chr5:54670185(+) A-I      intronic chr5:54609147(+) A-I      intronic chr5:54700659(+) A-I      intronic chr5:54647132(+) A-I      intronic chr5:54669965(+) A-I      intronic chr5:54700735(+) A-I      intronic chr5:54698968(+) A-I      intronic chr5:54621452(+) A-I      intronic chr5:54697115(+) A-I      intronic chr5:54670249(+) A-I      intronic chr5:54713941(+) A-I      intronic chr5:54665869(+) A-I      intronic chr5:54703824(+) A-I      intronic chr5:54647230(+) A-I      intronic chr5:54621259(+) A-I      intronic chr5:54622149(+) A-I      intronic chr5:54670255(+) A-I      intronic chr5:54669966(+) A-I      intronic chr5:54698909(+) A-I      intronic chr5:54687178(+) A-I      intronic chr5:54703775(+) A-I      intronic chr5:54700823(+) A-I      intronic chr5:54713896(+) A-I      intronic chr5:54696980(+) A-I      intronic chr5:54698811(+) A-I      intronic chr5:54714814(+) A-I      intronic chr5:54714856(+) A-I      intronic chr5:54698769(+) A-I      intronic chr5:54686008(+) A-I      intronic chr5:54705771(+) A-I      intronic chr5:54647960(+) A-I      intronic chr5:54664159(+) A-I      intronic chr5:54714784(+) A-I      intronic chr5:54606706(+) A-I      intronic chr5:54703808(+) A-I      intronic chr5:54622038(+) A-I      intronic chr5:54714847(+) A-I      intronic chr5:54609058(+) A-I      intronic chr5:54647266(+) A-I      intronic chr5:54704916(+) A-I      intronic chr5:54703786(+) A-I      intronic chr5:54621967(+) A-I      intronic chr5:54705823(+) A-I      intronic chr5:54700712(+) A-I      intronic chr5:54698948(+) A-I      intronic chr5:54670241(+) A-I      intronic chr5:54700899(+) A-I      intronic chr5:54662198(+) A-I      intronic chr5:54622041(+) A-I      intronic chr5:54700887(+) A-I      intronic chr5:54621301(+) A-I      intronic chr5:54621299(+) A-I      intronic chr5:54698761(+) A-I      intronic chr5:54664121(+) A-I      intronic chr5:54664053(+) A-I      intronic chr5:54620415(+) A-I      ncRNA

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-3p	Nucleus PML tissue     32324824
	MTREX	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-3p
Interactor2: MTREX

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg