Basic Information:

  VIRBase ID:  

VHID00670936

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          CTXN1:  NM_206833     

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Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	CTXN1
miRBase Accession/Entrez ID	MIMAT0009147	404217
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CTXN

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CTXN1	chr19:7989411-7989412(-) m6A 3'UTR       25456834//24981863 chr19:7989543-7989544(-) m6A 3'UTR       24284625//25456834//24981863//27773536 chr19:7989587-7989588(-) m6A 3'UTR       24284625//27773536 chr19:7989812-7989813(-) m6A 3'UTR       24284625//24981863 chr19:7989877-7989878(-) m6A 3'UTR       24284625//24209618 chr19:7990011-7990012(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536 chr19:7990096-7990097(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536 chr19:7990227-7990228(-) m6A CDS       24284625//24209618//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	CTXN1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: CTXN1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg