Basic Information:

  VIRBase ID:  

VHID00670571

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          INTS6L:  NM_001351606     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	INTS6L
miRBase Accession/Entrez ID	MIMAT0009147	203522
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DDX26B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	INTS6L	chrX:134692797(+) A-I      intronic chrX:134694530(+) A-I      intronic chrX:134694534(+) A-I      intronic chrX:134694589(+) A-I      intronic chrX:134694512(+) A-I      intronic chrX:134694619(+) A-I      intronic chrX:134694942(+) A-I      intronic chrX:134694978(+) A-I      intronic chrX:134694988(+) A-I      intronic chrX:134695075(+) A-I      intronic chrX:134695093(+) A-I      intronic chrX:134698396(+) A-I      intronic chrX:134694513(+) A-I      intronic chrX:134698514(+) A-I      intronic chrX:134702575(+) A-I      intronic chrX:134694615(+) A-I      intronic chrX:134674857(+) A-I      intronic chrX:134698423(+) A-I      intronic chrX:134674839(+) A-I      intronic chrX:134674721(+) A-I      intronic chrX:134676280(+) A-I      intronic chrX:134698578(+) A-I      intronic chrX:134676151(+) A-I      intronic chrX:134689799(+) A-I      intronic chrX:134702693(+) A-I      intronic chrX:134692891(+) A-I      intronic chrX:134694772(+) A-I      intronic chrX:134666855(+) A-I      intronic chrX:134698443(+) A-I      intronic chrX:134688956(+) A-I      intronic chrX:134694758(+) A-I      intronic chrX:134710105(+) A-I      intronic chrX:134695043(+) A-I      intronic chrX:134657175(+) A-I      intronic chrX:134702514(+) A-I      intronic chrX:134657046(+) A-I      intronic chrX:134695088(+) A-I      intronic chrX:134676181(+) A-I      intronic chrX:134692910(+) A-I      intronic chrX:134694947(+) A-I      intronic chrX:134698510(+) A-I      intronic chrX:134676167(+) A-I      intronic chrX:134694613(+) A-I      intronic chrX:134710173(+) A-I      intronic chrX:134674942(+) A-I      intronic chrX:134695112(+) A-I      intronic chrX:134694638(+) A-I      intronic chrX:134698577(+) A-I      intronic chrX:134692930(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	INTS6L	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: INTS6L

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg