Basic Information:

  VIRBase ID:  

VHID00669900

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          B3GNT9:  NM_033309     

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Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	B3GNT9
miRBase Accession/Entrez ID	MIMAT0009147	84752
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	B3GNT9	chr16:67182072-67182073(-) m6A 3'UTR       24284625 chr16:67182149-67182150(-) m6A 3'UTR       24284625 chr16:67182176-67182177(-) m6A 3'UTR       24284625 chr16:67182194-67182195(-) m6A 3'UTR       24284625 chr16:67182215-67182216(-) m6A 3'UTR       24284625 chr16:67182252-67182253(-) m6A 3'UTR       24284625//24981863//22608085 chr16:67182322-67182323(-) m6A 3'UTR       24284625//24981863 chr16:67182432-67182433(-) m6A 3'UTR       24284625//24981863//27773535 chr16:67182460-67182461(-) m6A 3'UTR       24284625//24981863//27773535 chr16:67182587-67182588(-) m6A 3'UTR       24284625//24981863//27773535 chr16:67182631-67182632(-) m6A 3'UTR       24284625//24981863 chr16:67182707-67182708(-) m6A 3'UTR       24284625//24981863 chr16:67182741-67182742(-) m6A 3'UTR       24284625//24981863 chr16:67182836-67182837(-) m6A 3'UTR       24284625//24981863 chr16:67182870-67182871(-) m6A 3'UTR       24284625 chr16:67183146-67183147(-) m6A 3'UTR       24284625//24981863 chr16:67183186-67183187(-) m6A CDS       24284625//24981863 chr16:67183636-67183637(-) m6A CDS       24284625//25456834//24981863//22575960 chr16:67183648-67183649(-) m6A CDS       24284625//25456834//24981863//22575960 chr16:67183816-67183817(-) m6A CDS       24284625//25456834//24981863//22575960 chr16:67183862-67183863(-) m6A CDS       24284625//25456834//24981863//22575960 chr16:67184005-67184006(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr16:67184038-67184039(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr16:67184113-67184114(-) m6A CDS       24284625//25456834//24981863//27371828//22575960 chr16:67184148-67184149(-) m6A CDS       24284625//25456834//24981863//28052920//27371828//22575960 chr16:67184176-67184177(-) m6A CDS       24284625//25456834//24981863//28052920//27371828//22575960 chr16:67184232-67184233(-) m6A CDS       24284625//25456834//24981863//22575960 chr16:67184532-67184533(-) m6A 5'UTR       - chr16:67184827-67184828(-) m6A 5'UTR       - chr16:67185016-67185017(-) m6A 5'UTR       24284625 chr16:67185035-67185036(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	B3GNT9	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: B3GNT9

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg