Detail Information

Basic Information:


  VIRBase ID:  

VHID00669688

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:           FBXL18:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol jcv-miR-J1-5p FBXL18
miRBase
Accession/Entrez ID		 MIMAT0009147 80028
Organism JC polyomavirus (JCPyV) Homo sapiens
Category miRNA mRNA
Alias - Fbl18

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FBXL18
chr7:5549877(-) A-I      intronic
chr7:5549851(-) A-I      intronic
chr7:5549784(-) A-I      intronic
chr7:5547343(-) A-I      intronic
chr7:5525505(-) A-I      intronic
chr7:5524663(-) A-I      intronic
chr7:5548234(-) A-I      intronic
chr7:5549770(-) A-I      intronic
chr7:5546361(-) A-I      intronic
chr7:5546358(-) A-I      intronic
chr7:5546235(-) A-I      intronic
chr7:5546225(-) A-I      intronic
chr7:5545956(-) A-I      intronic
chr7:5545572(-) A-I      intronic
chr7:5544209(-) A-I      intronic
chr7:5549736(-) A-I      intronic
chr7:5547988(-) A-I      intronic
chr7:5547966(-) A-I      intronic
chr7:5549715(-) A-I      intronic
chr7:5544164(-) A-I      intronic
chr7:5544073(-) A-I      intronic
chr7:5543849(-) A-I      intronic
chr7:5543395(-) A-I      intronic
chr7:5543185(-) A-I      intronic
chr7:5543106(-) A-I      intronic
chr7:5539649(-) A-I      intronic
chr7:5539222(-) A-I      intronic
chr7:5539214(-) A-I      intronic
chr7:5549161(-) A-I      intronic
chr7:5549158(-) A-I      intronic
chr7:5538254(-) A-I      intronic
chr7:5538286(-) A-I      intronic
chr7:5546407(-) A-I      intronic
chr7:5533131(-) A-I      intronic
chr7:5539213(-) A-I      intronic
chr7:5539197(-) A-I      intronic
chr7:5532922(-) A-I      intronic
chr7:5539194(-) A-I      intronic
chr7:5539175(-) A-I      intronic
chr7:5526162(-) A-I      intronic
chr7:5526117(-) A-I      intronic
chr7:5525568(-) A-I      intronic
chr7:5525522(-) A-I      intronic
chr7:5551754(-) A-I      intronic
chr7:5551290(-) A-I      intronic
chr7:5539168(-) A-I      intronic
chr7:5550965(-) A-I      intronic
chr7:5548822(-) A-I      intronic
chr7:5548767(-) A-I      intronic
chr7:5548712(-) A-I      intronic
chr7:5549887(-) A-I      intronic
chr7:5538421(-) A-I      intronic
chr7:5537920(-) A-I      intronic
chr7:5537899(-) A-I      intronic
chr7:5537887(-) A-I      intronic
chr7:5537857(-) A-I      intronic
chr7:5537851(-) A-I      intronic
chr7:5533506(-) A-I      intronic
chr7:5533419(-) A-I      intronic
chr7:5533413(-) A-I      intronic
chr7:5516790(-) A-I      3'UTR
chr7:5517185(-) A-I      3'UTR
chr7:5517236(-) A-I      3'UTR
chr7:5517233(-) A-I      3'UTR
chr7:5516719(-) A-I      3'UTR
chr7:5516721(-) A-I      3'UTR
chr7:5516723(-) A-I      3'UTR
chr7:5517168(-) A-I      3'UTR
chr7:5516777(-) A-I      3'UTR
chr7:5516785(-) A-I      3'UTR
chr7:5517091(-) A-I      3'UTR
chr7:5517293(-) A-I      3'UTR
chr7:5516791(-) A-I      3'UTR
chr7:5517078(-) A-I      3'UTR
chr7:5517083(-) A-I      3'UTR
chr7:5517089(-) A-I      3'UTR
chr7:5517090(-) A-I      3'UTR
chr7:5516157(-) A-I      3'UTR
chr7:5516165(-) A-I      3'UTR
chr7:5517116(-) A-I      3'UTR
chr7:5516173(-) A-I      3'UTR
chr7:5516189(-) A-I      3'UTR
chr7:5516208(-) A-I      3'UTR
chr7:5516221(-) A-I      3'UTR
chr7:5516282(-) A-I      3'UTR
chr7:5516299(-) A-I      3'UTR
chr7:5516367(-) A-I      3'UTR
chr7:5516546(-) A-I      3'UTR
chr7:5516554(-) A-I      3'UTR
chr7:5516584(-) A-I      3'UTR
chr7:5516591(-) A-I      3'UTR
chr7:5516595(-) A-I      3'UTR
chr7:5516624(-) A-I      3'UTR
chr7:5516695(-) A-I      3'UTR
chr7:5516693(-) A-I      3'UTR
chr7:5516627(-) A-I      3'UTR
chr7:5516630(-) A-I      3'UTR
chr7:5516640(-) A-I      3'UTR
chr7:5516643(-) A-I      3'UTR
chr7:5516647(-) A-I      3'UTR
chr7:5516683(-) A-I      3'UTR
chr7:5517151(-) A-I      3'UTR
chr7:5516205(-) A-I      3'UTR
chr7:5517154(-) A-I      3'UTR
chr7:5516690(-) A-I      3'UTR
chr7:5517176(-) A-I      3'UTR
chr7:5517205(-) A-I      3'UTR
chr7:5517209(-) A-I      3'UTR
chr7:5517238(-) A-I      3'UTR
chr7:5517246(-) A-I      3'UTR
chr7:5517250(-) A-I      3'UTR
chr7:5517264(-) A-I      3'UTR
chr7:5517270(-) A-I      3'UTR
chr7:5533530(-) A-I      intronic
chr7:5538340(-) A-I      intronic
chr7:5539485(-) A-I      intronic
chr7:5533712(-) A-I      intronic
chr7:5545791(-) A-I      intronic
chr7:5547845(-) A-I      intronic
chr7:5539279(-) A-I      intronic
chr7:5537745(-) A-I      intronic
chr7:5538476(-) A-I      intronic
chr7:5547308(-) A-I      intronic
chr7:5533721(-) A-I      intronic
chr7:5546158(-) A-I      intronic
chr7:5542952(-) A-I      intronic
chr7:5548620(-) A-I      intronic
chr7:5547678(-) A-I      intronic
chr7:5533345(-) A-I      intronic
chr7:5548233(-) A-I      intronic
chr7:5545952(-) A-I      intronic
chr7:5538259(-) A-I      intronic
chr7:5547607(-) A-I      intronic
chr7:5538264(-) A-I      intronic
chr7:5538420(-) A-I      intronic
chr7:5538436(-) A-I      intronic
chr7:5542289(-) A-I      intronic
chr7:5538262(-) A-I      intronic
chr7:5543266(-) A-I      intronic
chr7:5551287(-) A-I      intronic
chr7:5532831(-) A-I      intronic
chr7:5524616(-) A-I      intronic
chr7:5542340(-) A-I      intronic
chr7:5539510(-) A-I      intronic
chr7:5524664(-) A-I      intronic
chr7:5546017(-) A-I      intronic
chr7:5543939(-) A-I      intronic
chr7:5536391(-) A-I      intronic
chr7:5546325(-) A-I      intronic
chr7:5533781(-) A-I      intronic
chr7:5545660(-) A-I      intronic
chr7:5544074(-) A-I      intronic
chr7:5538383(-) A-I      intronic
chr7:5544107(-) A-I      intronic
chr7:5545585(-) A-I      intronic
chr7:5532854(-) A-I      intronic
chr7:5538382(-) A-I      intronic
chr7:5543123(-) A-I      intronic
chr7:5533641(-) A-I      intronic
chr7:5538330(-) A-I      intronic
chr7:5545696(-) A-I      intronic
chr7:5524473(-) A-I      intronic
chr7:5539267(-) A-I      intronic
chr7:5517221(-) A-I      3'UTR
chr7:5520465(-) A-I      3'UTR
chr7:5517311(-) A-I      3'UTR
chr7:5517273(-) A-I      3'UTR
chr7:5538437(-) A-I      intronic
chr7:5524483(-) A-I      intronic
chr7:5550001(-) A-I      intronic
chr7:5539601(-) A-I      intronic
chr7:5545593(-) A-I      intronic
chr7:5525376(-) A-I      intronic
chr7:5532871(-) A-I      intronic
chr7:5539125(-) A-I      intronic
chr7:5542958(-) A-I      intronic
chr7:5539574(-) A-I      intronic
chr7:5547655(-) A-I      intronic
chr7:5525291(-) A-I      intronic
chr7:5549139(-) A-I      intronic
chr7:5536308(-) A-I      intronic
chr7:5533373(-) A-I      intronic
chr7:5550008(-) A-I      intronic
chr7:5538477(-) A-I      intronic
chr7:5538397(-) A-I      intronic
chr7:5522501(-) A-I      intronic
chr7:5533791(-) A-I      intronic
chr7:5549250(-) A-I      intronic
chr7:5533441(-) A-I      intronic
chr7:5524268(-) A-I      intronic
chr7:5546255(-) A-I      intronic
chr7:5533418(-) A-I      intronic
chr7:5524251(-) A-I      intronic
chr7:5532883(-) A-I      intronic
chr7:5524174(-) A-I      intronic
chr7:5536295(-) A-I      intronic
chr7:5536781(-) A-I      intronic
chr7:5533820(-) A-I      intronic
chr7:5547584(-) A-I      intronic
chr7:5543952(-) A-I      intronic
chr7:5545634(-) A-I      intronic
chr7:5524299(-) A-I      intronic
chr7:5546352(-) A-I      intronic
chr7:5538313(-) A-I      intronic
chr7:5547700(-) A-I      intronic
chr7:5543356(-) A-I      intronic
chr7:5536732(-) A-I      intronic
chr7:5543081(-) A-I      intronic
chr7:5549821(-) A-I      intronic
chr7:5546081(-) A-I      intronic
chr7:5546065(-) A-I      intronic
chr7:5551223(-) A-I      intronic
chr7:5542907(-) A-I      intronic
chr7:5539428(-) A-I      intronic
chr7:5547731(-) A-I      intronic
chr7:5539094(-) A-I      intronic
chr7:5539300(-) A-I      intronic
chr7:5545704(-) A-I      intronic
chr7:5533198(-) A-I      intronic
chr7:5546018(-) A-I      intronic
chr7:5539646(-) A-I      intronic
chr7:5523980(-) A-I      intronic
chr7:5544290(-) A-I      intronic
chr7:5545847(-) A-I      intronic
chr7:5548066(-) A-I      intronic
chr7:5533008(-) A-I      intronic
chr7:5547459(-) A-I      intronic
chr7:5549676(-) A-I      intronic
chr7:5545558(-) A-I      intronic
chr7:5548741(-) A-I      intronic
chr7:5524368(-) A-I      intronic
chr7:5546285(-) A-I      intronic
chr7:5547510(-) A-I      intronic
chr7:5524692(-) A-I      intronic
chr7:5546381(-) A-I      intronic
chr7:5545977(-) A-I      intronic
chr7:5532783(-) A-I      intronic
chr7:5537815(-) A-I      intronic
chr7:5522494(-) A-I      intronic
chr7:5526119(-) A-I      intronic
chr7:5536540(-) A-I      intronic
chr7:5546356(-) A-I      intronic
chr7:5547729(-) A-I      intronic
chr7:5549081(-) A-I      intronic
chr7:5526284(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FBXL18
chr7:5517221(-) A-I exon 3'UTR    22327324
chr7:5538259(-) A-I intron -    22028664
chr7:5538262(-) A-I intron -    22028664
chr7:5538264(-) A-I intron -    22028664
chr7:5538313(-) A-I intron -    22028664
chr7:5538326(-) A-I intron -    22028664
chr7:5538330(-) A-I intron -    22028664
chr7:5538334(-) A-I intron -    22028664
chr7:5538340(-) A-I intron -    22028664
chr7:5538382(-) A-I intron -    22028664   //21960545
chr7:5538383(-) A-I intron -    22028664
chr7:5538386(-) A-I intron -    22028664
chr7:5538420(-) A-I intron -    22028664
chr7:5538436(-) A-I intron -    22028664
chr7:5538455(-) A-I intron -    22028664
chr7:5516630(-) A-G exon 3'UTR    21725310
chr7:5517083(-) A-G exon 3'UTR    21725310
chr7:5523980(-) A-G intron -    22484847
chr7:5524407(-) A-G intron -    22484847
chr7:5525957(-) C-T intron -    22484847
chr7:5526119(-) A-G intron -    22484847
chr7:5526245(-) A-G intron -    22484847
chr7:5526284(-) A-G intron -    22484847
chr7:5530372(-) C-T intron -    22484847
chr7:5533122(-) A-G intron -    22484847
chr7:5533198(-) A-G intron -    22484847
chr7:5533418(-) A-G intron -    22484847
chr7:5533421(-) A-G intron -    22484847
chr7:5533441(-) A-G intron -    22484847
chr7:5533712(-) A-G intron -    22484847
chr7:5538330(-) A-G intron -    22484847
chr7:5539267(-) A-G intron -    22484847
chr7:5539601(-) A-G intron -    22484847
chr7:5539644(-) A-G intron -    22484847
chr7:5542289(-) A-G intron -    22484847
chr7:5543057(-) A-G intron -    22484847
chr7:5543567(-) A-G intron -    22484847
chr7:5543939(-) A-G intron -    22484847
chr7:5544074(-) A-G intron -    22484847
chr7:5544107(-) A-G intron -    22484847
chr7:5544110(-) A-G intron -    22484847
chr7:5544140(-) A-G intron -    22484847
chr7:5544290(-) A-G intron -    22484847
chr7:5545593(-) A-G intron -    22484847
chr7:5545696(-) A-G intron -    22484847
chr7:5545951(-) A-G intron -    22484847
chr7:5546285(-) A-G intron -    22484847
chr7:5546325(-) A-G intron -    22484847
chr7:5546326(-) A-G intron -    22484847
chr7:5546384(-) A-G intron -    22484847
chr7:5547308(-) A-G intron -    22484847
chr7:5547459(-) A-G intron -    22484847
chr7:5547592(-) A-G intron -    22484847
chr7:5547607(-) A-G intron -    22484847
chr7:5547726(-) T-C intron -    22484847
chr7:5547729(-) A-G intron -    22484847
chr7:5547731(-) A-G intron -    22484847
chr7:5547734(-) A-G intron -    22484847
chr7:5547814(-) A-G intron -    22484847
chr7:5547845(-) A-G intron -    22484847
chr7:5547956(-) A-G intron -    22484847
chr7:5548741(-) A-G intron -    22484847
chr7:5549250(-) A-G intron -    22484847
chr7:5549753(-) A-G intron -    22484847
chr7:5550878(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FBXL18
chr7:5520290-5520291(-) m6A 3'UTR//intron       24284625
chr7:5520506-5520507(-) m6A 3'UTR//intron       27773535
chr7:5520573-5520574(-) m6A 3'UTR//intron       27773535
chr7:5520581-5520582(-) m6A 3'UTR//intron       27773535
chr7:5520755-5520756(-) m6A 3'UTR//intron       24284625//24981863//27773535//22575960
chr7:5520837-5520838(-) m6A 3'UTR//intron       24284625//25456834//24981863//22575960
chr7:5520855-5520856(-) m6A 3'UTR//intron       24284625//25456834//24981863//22575960
chr7:5520862-5520863(-) m6A 3'UTR//intron       24284625//25456834//24981863//22575960
chr7:5521061-5521062(-) m6A 3'UTR//intron       24284625//25456834//24981863//22608085
chr7:5521149-5521150(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5521238-5521239(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5521338-5521339(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5521418-5521419(-) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27773536//22608085
chr7:5521426-5521427(-) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27773536//22608085
chr7:5529290-5529291(-) m6A 3'UTR//intron       24284625
chr7:5529735-5529736(-) m6A CDS//intron       25456834//24981863
chr7:5535482-5535483(-) m6A intron       -
chr7:5535519-5535520(-) m6A intron       -
chr7:5540124-5540125(-) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr7:5540154-5540155(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr7:5540337-5540338(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5540441-5540442(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:5540457-5540458(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:5540733-5540734(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5540770-5540771(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5540820-5540821(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5540853-5540854(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5540877-5540878(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:5541048-5541049(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr7:5541057-5541058(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr7:5541117-5541118(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr7:5541213-5541214(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr7:5541285-5541286(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960
chr7:5541525-5541526(-) m6A CDS       24284625//27371828
chr7:5541560-5541561(-) m6A CDS       24284625//27371828
chr7:5541651-5541652(-) m6A CDS       24284625
chr7:5545049-5545050(-) m6A CDS       24284625
chr7:5553317-5553318(-) m6A 5'UTR       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate jcv-miR-J1-5p
Nucleus PML tissue     32324824
FBXL18
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HeLa-S3 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: jcv-miR-J1-5p
Interactor2: FBXL18

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...