Basic Information:

  VIRBase ID:  

VHID00669394

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          NYAP2:  NM_020864     

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Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	NYAP2
miRBase Accession/Entrez ID	MIMAT0009147	57624
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA1486

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NYAP2	chr2:226310777(+) A-I      intronic chr2:226452389(+) A-I      intronic chr2:226452255(+) A-I      intronic chr2:226297933(+) A-I      intronic chr2:226452279(+) A-I      intronic chr2:226452167(+) A-I      intronic chr2:226452240(+) A-I      intronic chr2:226452312(+) A-I      intronic chr2:226452213(+) A-I      intronic chr2:226452280(+) A-I      intronic chr2:226452241(+) A-I      intronic chr2:226452268(+) A-I      intronic chr2:226452377(+) A-I      intronic chr2:226452375(+) A-I      intronic chr2:226452271(+) A-I      intronic chr2:226452249(+) A-I      intronic chr2:226452220(+) A-I      intronic chr2:226452294(+) A-I      intronic chr2:226452209(+) A-I      intronic chr2:226452388(+) A-I      intronic chr2:226285865(+) A-I      intronic chr2:226452099(+) A-I      intronic chr2:226452227(+) A-I      intronic chr2:226452212(+) A-I      intronic chr2:226452102(+) A-I      intronic chr2:226452250(+) A-I      intronic chr2:226318927(+) A-I      intronic chr2:226392468(+) A-I      intronic chr2:226325588(+) A-I      intronic chr2:226454312(+) A-I      intronic chr2:226325630(+) A-I      intronic chr2:226452758(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NYAP2	chr2:226452099(+) A-I intron -    22028664 chr2:226452102(+) A-I intron -    22028664 chr2:226452167(+) A-I intron -    22028664 chr2:226452209(+) A-I intron -    22028664 chr2:226452212(+) A-I intron -    22028664 chr2:226452213(+) A-I intron -    22028664 chr2:226452220(+) A-I intron -    22028664 chr2:226452227(+) A-I intron -    22028664 chr2:226452240(+) A-I intron -    22028664 chr2:226452241(+) A-I intron -    22028664 chr2:226452249(+) A-I intron -    22028664 chr2:226452250(+) A-I intron -    22028664 chr2:226452255(+) A-I intron -    22028664 chr2:226452268(+) A-I intron -    22028664 chr2:226452271(+) A-I intron -    22028664 chr2:226452279(+) A-I intron -    22028664 chr2:226452280(+) A-I intron -    22028664 chr2:226452294(+) A-I intron -    22028664 chr2:226452312(+) A-I intron -    22028664 chr2:226452375(+) A-I intron -    22028664 chr2:226452377(+) A-I intron -    22028664 chr2:226452388(+) A-I intron -    22028664 chr2:226452389(+) A-I intron -    22028664

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NYAP2	chr2:226378175-226378176(+) m6A CDS       24284625 chr2:226378275-226378276(+) m6A CDS       24284625 chr2:226378290-226378291(+) m6A CDS       24284625 chr2:226378301-226378302(+) m6A CDS       24284625 chr2:226378333-226378334(+) m6A CDS       24284625 chr2:226378369-226378370(+) m6A CDS       24284625 chr2:226378381-226378382(+) m6A CDS       24284625 chr2:226446666-226446667(+) m6A CDS       24284625 chr2:226446672-226446673(+) m6A CDS       24284625 chr2:226446714-226446715(+) m6A CDS       24284625//22575960 chr2:226446731-226446732(+) m6A CDS       24284625//22575960 chr2:226446806-226446807(+) m6A CDS       24284625//22575960 chr2:226446842-226446843(+) m6A CDS       24284625//22575960 chr2:226446884-226446885(+) m6A CDS       24284625//22575960 chr2:226446896-226446897(+) m6A CDS       24284625//22575960 chr2:226447046-226447047(+) m6A CDS       24284625//22575960 chr2:226447131-226447132(+) m6A CDS       24284625//22575960 chr2:226447251-226447252(+) m6A CDS       24284625//22575960 chr2:226447308-226447309(+) m6A CDS       24284625//22575960 chr2:226447338-226447339(+) m6A CDS       24284625//22575960 chr2:226447399-226447400(+) m6A CDS       24284625//22575960 chr2:226447566-226447567(+) m6A CDS       22575960 chr2:226447610-226447611(+) m6A CDS       24284625//22575960 chr2:226447648-226447649(+) m6A CDS       24284625//22575960 chr2:226518545-226518546(+) Y 3'UTR       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	NYAP2	Exosome Blood     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: NYAP2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg