Detail

Basic Information:

VIRBase ID:

VHID00668954

Virus:

JC polyomavirus (JCPyV)

Host:

Homo sapiens

Confidence Score:

0.2381

Interaction Type:

Virus-Host interaction

Predicted Binding:

*It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	GPR85
miRBase Accession/Entrez ID	MIMAT0009147	54329
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SREB//SREB2

RNA Modification:

Resource

Symbol

ModificationPosition

Type

Genomic Context

PMID

RMBase

GPR85

chr7:112723192-112723193(-)	m6A	3'UTR	24981863
chr7:112723208-112723209(-)	m6A	3'UTR	24981863
chr7:112723237-112723238(-)	m6A	3'UTR	24981863
chr7:112723245-112723246(-)	m6A	3'UTR	24981863
chr7:112723266-112723267(-)	m6A	3'UTR	24981863
chr7:112723312-112723313(-)	m6A	3'UTR	24981863
chr7:112723326-112723327(-)	m6A	3'UTR	24981863
chr7:112723336-112723337(-)	m6A	3'UTR	24981863
chr7:112723406-112723407(-)	m6A	3'UTR	24981863
chr7:112723439-112723440(-)	m6A	3'UTR	24981863
chr7:112723444-112723445(-)	m6A	3'UTR	24981863
chr7:112723985-112723986(-)	m6A	CDS	24981863
chr7:112724091-112724092(-)	m6A	CDS	-
chr7:112724096-112724097(-)	m6A	CDS	-
chr7:112724337-112724338(-)	m6A	CDS	24981863//27773535
chr7:112724505-112724506(-)	m6A	CDS	24981863//22608085
chr7:112724514-112724515(-)	m6A	CDS	24981863//22608085
chr7:112724628-112724629(-)	m6A	CDS	24981863//22608085
chr7:112724707-112724708(-)	m6A	CDS	24981863//22608085
chr7:112724768-112724769(-)	m6A	CDS	24981863//22608085
chr7:112724812-112724813(-)	m6A	5'UTR//exon	24981863//22608085

RNA Localization:

Resource

Symbol

Subcellular Localization

Tissue or Cell Line

PMID

RNALocate

jcv-miR-J1-5p

Nucleus

PML tissue

32324824