Detail Information

Basic Information:


  VIRBase ID:  

VHID00668926

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:           MYOZ2:      

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Interactor Information:


Interactor1 Interactor2
Symbol jcv-miR-J1-5p MYOZ2
miRBase
Accession/Entrez ID
MIMAT0009147 51778
Organism JC polyomavirus (JCPyV) Homo sapiens
Category miRNA mRNA
Alias - C4orf5//CMH16//CS-1//FATZ-2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MYOZ2
chr4:120096747(+) A-I      intronic
chr4:120096746(+) A-I      intronic
chr4:120096658(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MYOZ2
chr4:120057132(+) A-I exon 5'UTR    19478186

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MYOZ2
chr4:120057041-120057042(+) m6A 5'UTR       24981863
chr4:120057094-120057095(+) m6A 5'UTR       24981863
chr4:120057669-120057670(+) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate jcv-miR-J1-5p
Nucleus PML tissue     32324824
MYOZ2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: jcv-miR-J1-5p
Interactor2: MYOZ2

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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