Basic Information:

  VIRBase ID:  

VHID00668602

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          TECPR1:  NM_015395     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	TECPR1
miRBase Accession/Entrez ID	MIMAT0009147	25851
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TECPR1	chr7:97864774(-) A-I      intronic chr7:97849547(-) A-I      intronic chr7:97874899(-) A-I      intronic chr7:97879906(-) A-I      intronic chr7:97879903(-) A-I      intronic chr7:97868695(-) A-I      intronic chr7:97869897(-) A-I      intronic chr7:97869931(-) A-I      intronic chr7:97879898(-) A-I      intronic chr7:97879838(-) A-I      intronic chr7:97879828(-) A-I      intronic chr7:97879157(-) A-I      intronic chr7:97879154(-) A-I      intronic chr7:97878414(-) A-I      intronic chr7:97878396(-) A-I      intronic chr7:97878136(-) A-I      intronic chr7:97877971(-) A-I      intronic chr7:97877233(-) A-I      intronic chr7:97877163(-) A-I      intronic chr7:97877146(-) A-I      intronic chr7:97876748(-) A-I      intronic chr7:97876734(-) A-I      intronic chr7:97873163(-) A-I      intronic chr7:97876318(-) A-I      intronic chr7:97876302(-) A-I      intronic chr7:97876287(-) A-I      intronic chr7:97876284(-) A-I      intronic chr7:97876071(-) A-I      intronic chr7:97875929(-) A-I      intronic chr7:97873180(-) A-I      intronic chr7:97879917(-) A-I      intronic chr7:97869800(-) A-I      intronic chr7:97879082(-) A-I      intronic chr7:97879059(-) A-I      intronic chr7:97874908(-) A-I      intronic chr7:97869896(-) A-I      intronic chr7:97869895(-) A-I      intronic chr7:97869882(-) A-I      intronic chr7:97869838(-) A-I      intronic chr7:97869828(-) A-I      intronic chr7:97869374(-) A-I      intronic chr7:97869359(-) A-I      intronic chr7:97869255(-) A-I      intronic chr7:97869244(-) A-I      intronic chr7:97868697(-) A-I      intronic chr7:97867008(-) A-I      intronic chr7:97864663(-) A-I      intronic chr7:97849101(-) A-I      intronic chr7:97849118(-) A-I      intronic chr7:97864648(-) A-I      intronic chr7:97864277(-) A-I      intronic chr7:97864187(-) A-I      intronic chr7:97864088(-) A-I      intronic chr7:97849130(-) A-I      intronic chr7:97849137(-) A-I      intronic chr7:97849960(-) A-I      intronic chr7:97849998(-) A-I      intronic chr7:97850040(-) A-I      intronic chr7:97873179(-) A-I      intronic chr7:97864085(-) A-I      intronic chr7:97850054(-) A-I      intronic chr7:97850490(-) A-I      intronic chr7:97864077(-) A-I      intronic chr7:97863640(-) A-I      intronic chr7:97863561(-) A-I      intronic chr7:97856162(-) A-I      intronic chr7:97855074(-) A-I      intronic chr7:97854784(-) A-I      intronic chr7:97850531(-) A-I      intronic chr7:97850567(-) A-I      intronic chr7:97850625(-) A-I      intronic chr7:97854603(-) A-I      intronic chr7:97854747(-) A-I      intronic chr7:97873154(-) A-I      intronic chr7:97873158(-) A-I      intronic chr7:97873159(-) A-I      intronic chr7:97864762(-) A-I      intronic chr7:97877173(-) A-I      intronic chr7:97868804(-) A-I      intronic chr7:97876026(-) A-I      intronic chr7:97855058(-) A-I      intronic chr7:97850097(-) A-I      intronic chr7:97849544(-) A-I      intronic chr7:97850162(-) A-I      intronic chr7:97876680(-) A-I      intronic chr7:97875962(-) A-I      intronic chr7:97850918(-) A-I      intronic chr7:97878111(-) A-I      intronic chr7:97855094(-) A-I      intronic chr7:97878059(-) A-I      intronic chr7:97848951(-) A-I      intronic chr7:97850186(-) A-I      intronic chr7:97869999(-) A-I      intronic chr7:97877974(-) A-I      intronic chr7:97850357(-) A-I      intronic chr7:97876388(-) A-I      intronic chr7:97879147(-) A-I      intronic chr7:97850459(-) A-I      intronic chr7:97870130(-) A-I      intronic chr7:97849573(-) A-I      intronic chr7:97878338(-) A-I      intronic chr7:97869229(-) A-I      intronic chr7:97867161(-) A-I      intronic chr7:97864138(-) A-I      intronic chr7:97876733(-) A-I      intronic chr7:97876557(-) A-I      intronic chr7:97874912(-) A-I      intronic chr7:97849774(-) A-I      intronic chr7:97868861(-) A-I      intronic chr7:97869258(-) A-I      intronic chr7:97864835(-) A-I      intronic chr7:97876301(-) A-I      intronic chr7:97869799(-) A-I      intronic chr7:97856121(-) A-I      intronic chr7:97879944(-) A-I      intronic chr7:97865047(-) A-I      intronic chr7:97846118(-) A-I      3'UTR chr7:97864970(-) A-I      intronic chr7:97879186(-) A-I      intronic chr7:97866980(-) A-I      intronic chr7:97850093(-) A-I      intronic chr7:97876059(-) A-I      intronic chr7:97869890(-) A-I      intronic chr7:97864312(-) A-I      intronic chr7:97864161(-) A-I      intronic chr7:97849397(-) A-I      intronic chr7:97868742(-) A-I      intronic chr7:97855098(-) A-I      intronic chr7:97879148(-) A-I      intronic chr7:97876338(-) A-I      intronic chr7:97877159(-) A-I      intronic chr7:97864285(-) A-I      intronic chr7:97849508(-) A-I      intronic chr7:97864147(-) A-I      intronic chr7:97879683(-) A-I      intronic chr7:97878438(-) A-I      intronic chr7:97849625(-) A-I      intronic chr7:97850930(-) A-I      intronic chr7:97864902(-) A-I      intronic chr7:97864120(-) A-I      intronic chr7:97876547(-) A-I      intronic chr7:97864595(-) A-I      intronic chr7:97864985(-) A-I      intronic chr7:97850035(-) A-I      intronic chr7:97869358(-) A-I      intronic chr7:97848969(-) A-I      intronic chr7:97850583(-) A-I      intronic chr7:97850292(-) A-I      intronic chr7:97850042(-) A-I      intronic chr7:97873288(-) A-I      intronic chr7:97850492(-) A-I      intronic chr7:97850369(-) A-I      intronic chr7:97863738(-) A-I      intronic chr7:97864594(-) A-I      intronic chr7:97876393(-) A-I      intronic chr7:97867030(-) A-I      intronic chr7:97873292(-) A-I      intronic chr7:97863670(-) A-I      intronic chr7:97878361(-) A-I      intronic chr7:97863631(-) A-I      intronic chr7:97850457(-) A-I      intronic chr7:97879098(-) A-I      intronic chr7:97849828(-) A-I      intronic chr7:97855063(-) A-I      intronic chr7:97850196(-) A-I      intronic chr7:97876072(-) A-I      intronic chr7:97855090(-) A-I      intronic chr7:97868865(-) A-I      intronic chr7:97855169(-) A-I      intronic chr7:97850876(-) A-I      intronic chr7:97863646(-) A-I      intronic chr7:97855068(-) A-I      intronic chr7:97878046(-) A-I      intronic chr7:97849620(-) A-I      intronic chr7:97876566(-) A-I      intronic chr7:97864979(-) A-I      intronic chr7:97848957(-) A-I      intronic chr7:97878037(-) A-I      intronic chr7:97876552(-) A-I      intronic chr7:97868815(-) A-I      intronic chr7:97850912(-) A-I      intronic chr7:97877257(-) A-I      intronic chr7:97849556(-) A-I      intronic chr7:97876023(-) A-I      intronic chr7:97863644(-) A-I      intronic chr7:97878329(-) A-I      intronic chr7:97876726(-) A-I      intronic chr7:97867343(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TECPR1	chr7:97849592(-) C-G intron -    22484847 chr7:97850171(-) A-G intron -    22484847 chr7:97850492(-) A-G intron -    22484847 chr7:97850514(-) A-G intron -    22484847 chr7:97855058(-) A-G intron -    22484847 chr7:97856471(-) G-C intron -    22484847 chr7:97863562(-) A-G intron -    22484847 chr7:97863631(-) A-G intron -    22484847 chr7:97863644(-) A-G intron -    22484847 chr7:97863646(-) A-G intron -    22484847 chr7:97863747(-) A-G intron -    22484847 chr7:97864312(-) A-G intron -    22484847 chr7:97864594(-) A-G intron -    22484847 chr7:97864595(-) A-G intron -    22484847 chr7:97864762(-) A-G intron -    22484847 chr7:97865020(-) A-G intron -    22484847 chr7:97865047(-) A-G intron -    22484847 chr7:97865059(-) A-G intron -    22484847 chr7:97868628(-) A-G intron -    22484847 chr7:97868798(-) A-G intron -    22484847 chr7:97868815(-) A-G intron -    22484847 chr7:97869358(-) A-G intron -    22484847 chr7:97869792(-) A-G intron -    22484847 chr7:97869999(-) A-G intron -    22484847 chr7:97876072(-) A-G intron -    22484847 chr7:97876614(-) A-G intron -    22484847 chr7:97876652(-) A-G intron -    22484847 chr7:97876733(-) A-G intron -    22484847 chr7:97877183(-) A-G intron -    22484847 chr7:97877237(-) A-G intron -    22484847 chr7:97877256(-) A-G intron -    22484847 chr7:97877313(-) A-G intron -    22484847 chr7:97877974(-) A-G intron -    22484847 chr7:97878046(-) A-G intron -    22484847 chr7:97878047(-) A-G intron -    22484847 chr7:97878111(-) A-G intron -    22484847 chr7:97878329(-) A-G intron -    22484847 chr7:97878338(-) A-G intron -    22484847 chr7:97878438(-) A-G intron -    22484847 chr7:97879147(-) A-G intron -    22484847 chr7:97879148(-) A-G intron -    22484847 chr7:97879170(-) A-G intron -    22484847 chr7:97879186(-) A-G intron -    22484847 chr7:97879834(-) A-G intron -    22484847 chr7:97879867(-) A-G intron -    22484847 chr7:97879944(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TECPR1	chr7:97843955-97843956(-) m6A 3'UTR       25456834 chr7:97844017-97844018(-) m6A 3'UTR       25456834 chr7:97844044-97844045(-) m6A 3'UTR       25456834 chr7:97844197-97844198(-) m6A 3'UTR       25456834 chr7:97844416-97844417(-) m6A 3'UTR       - chr7:97845581-97845582(-) m6A 3'UTR//intron       24209618//25456834//24981863//27371828 chr7:97845636-97845637(-) m6A 3'UTR//intron       24209618//25456834//24981863//27371828 chr7:97845856-97845857(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828 chr7:97845899-97845900(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828 chr7:97845964-97845965(-) m6A 3'UTR//intron       24284625//27773535//27371828 chr7:97846069-97846070(-) m6A 3'UTR//exon//intron       25456834//24981863 chr7:97846092-97846093(-) m6A 3'UTR//exon//intron       24209618//25456834//24981863 chr7:97846213-97846214(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr7:97846305-97846306(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr7:97846379-97846380(-) m6A 3'UTR//exon       24284625//27371828 chr7:97846386-97846387(-) m6A 3'UTR//exon       24284625//27371828 chr7:97846392-97846393(-) m6A 3'UTR//exon       27371828 chr7:97846511-97846512(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//27773536//22608085 chr7:97846581-97846582(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr7:97846593-97846594(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr7:97846804-97846805(-) m6A CDS//exon       24284625//24209618//27371828//27773536 chr7:97847016-97847017(-) m6A CDS//exon       24284625//27371828//27773536 chr7:97847071-97847072(-) m6A CDS//exon       27371828 chr7:97860311-97860312(-) m6A CDS//exon       27773536 chr7:97860338-97860339(-) m6A CDS//exon       27773536 chr7:97862879-97862880(-) m6A CDS//exon       27773536 chr7:97862942-97862943(-) m6A CDS//exon       25456834//24981863//27773536 chr7:97862991-97862992(-) m6A CDS//exon       24284625//24981863//27371828//27773536 chr7:97863047-97863048(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536 chr7:97863076-97863077(-) m6A CDS//exon       24209618//27371828//27773536 chr7:97863108-97863109(-) m6A CDS//exon       24209618//27371828//27773536 chr7:97863138-97863139(-) m6A CDS//exon       24209618//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	TECPR1	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: TECPR1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg