Basic Information:

  VIRBase ID:  

VHID00668338

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          KLF12:  NM_007249     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	KLF12
miRBase Accession/Entrez ID	MIMAT0009147	11278
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AP-2rep//AP2REP//HSPC122

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KLF12	chr13:74522551(-) A-I      intronic chr13:74522549(-) A-I      intronic chr13:74666063(-) A-I      intronic chr13:74522559(-) A-I      intronic chr13:74509833(-) A-I      intronic chr13:74398020(-) A-I      intronic chr13:74397986(-) A-I      intronic chr13:74397985(-) A-I      intronic chr13:74397953(-) A-I      intronic chr13:74397951(-) A-I      intronic chr13:74385342(-) A-I      intronic chr13:74562217(-) A-I      intronic chr13:74385322(-) A-I      intronic chr13:74292800(-) A-I      intronic chr13:74509837(-) A-I      intronic chr13:74666017(-) A-I      intronic chr13:74666020(-) A-I      intronic chr13:74666071(-) A-I      intronic chr13:74666065(-) A-I      intronic chr13:74521608(-) A-I      intronic chr13:74302005(-) A-I      intronic chr13:74397996(-) A-I      intronic chr13:74521585(-) A-I      intronic chr13:74511147(-) A-I      intronic chr13:74379565(-) A-I      intronic chr13:74482457(-) A-I      intronic chr13:74280251(-) A-I      intronic chr13:74442707(-) A-I      intronic chr13:74398004(-) A-I      intronic chr13:74280253(-) A-I      intronic chr13:74399022(-) A-I      intronic chr13:74398128(-) A-I      intronic chr13:74399039(-) A-I      intronic chr13:74399123(-) A-I      intronic chr13:74399124(-) A-I      intronic chr13:74704685(-) A-I      intronic chr13:74522467(-) A-I      intronic chr13:74280277(-) A-I      intronic chr13:74704712(-) A-I      intronic chr13:74292847(-) A-I      intronic chr13:74442057(-) A-I      intronic chr13:74292850(-) A-I      intronic chr13:74292858(-) A-I      intronic chr13:74442075(-) A-I      intronic chr13:74352612(-) A-I      intronic chr13:74442284(-) A-I      intronic chr13:74442600(-) A-I      intronic chr13:74293752(-) A-I      intronic chr13:74442672(-) A-I      intronic chr13:74313169(-) A-I      intronic chr13:74442716(-) A-I      intronic chr13:74334568(-) A-I      intronic chr13:74334739(-) A-I      intronic chr13:74399154(-) A-I      intronic chr13:74334741(-) A-I      intronic chr13:74352052(-) A-I      intronic chr13:74442779(-) A-I      intronic chr13:74352188(-) A-I      intronic chr13:74352677(-) A-I      intronic chr13:74352710(-) A-I      intronic chr13:74442801(-) A-I      intronic chr13:74442809(-) A-I      intronic chr13:74442660(-) A-I      intronic chr13:74352797(-) A-I      intronic chr13:74482350(-) A-I      intronic chr13:74359478(-) A-I      intronic chr13:74360798(-) A-I      intronic chr13:74482369(-) A-I      intronic chr13:74360924(-) A-I      intronic chr13:74482372(-) A-I      intronic chr13:74360938(-) A-I      intronic chr13:74482394(-) A-I      intronic chr13:74360953(-) A-I      intronic chr13:74360954(-) A-I      intronic chr13:74482646(-) A-I      intronic chr13:74511343(-) A-I      intronic chr13:74360979(-) A-I      intronic chr13:74379511(-) A-I      intronic chr13:74482414(-) A-I      intronic chr13:74380419(-) A-I      intronic chr13:74380420(-) A-I      intronic chr13:74380429(-) A-I      intronic chr13:74380454(-) A-I      intronic chr13:74279682(-) A-I      intronic chr13:74380458(-) A-I      intronic chr13:74381279(-) A-I      intronic chr13:74384259(-) A-I      intronic chr13:74384260(-) A-I      intronic chr13:74384266(-) A-I      intronic chr13:74482836(-) A-I      intronic chr13:74385244(-) A-I      intronic chr13:74385251(-) A-I      intronic chr13:74385255(-) A-I      intronic chr13:74385260(-) A-I      intronic chr13:74385220(-) A-I      intronic chr13:74359350(-) A-I      intronic chr13:74384139(-) A-I      intronic chr13:74442625(-) A-I      intronic chr13:74482782(-) A-I      intronic chr13:74704711(-) A-I      intronic chr13:74360763(-) A-I      intronic chr13:74312317(-) A-I      intronic chr13:74313288(-) A-I      intronic chr13:74358906(-) A-I      intronic chr13:74314678(-) A-I      intronic chr13:74385388(-) A-I      intronic chr13:74381433(-) A-I      intronic chr13:74292728(-) A-I      intronic chr13:74704682(-) A-I      intronic chr13:74399159(-) A-I      intronic chr13:74359052(-) A-I      intronic chr13:74385341(-) A-I      intronic chr13:74511135(-) A-I      intronic chr13:74482270(-) A-I      intronic chr13:74379695(-) A-I      intronic chr13:74701220(-) A-I      intronic chr13:74482771(-) A-I      intronic chr13:74509911(-) A-I      intronic chr13:74482283(-) A-I      intronic chr13:74442666(-) A-I      intronic chr13:74704670(-) A-I      intronic chr13:74689806(-) A-I      intronic chr13:74666621(-) A-I      intronic chr13:74642826(-) A-I      intronic chr13:74642808(-) A-I      intronic chr13:74642805(-) A-I      intronic chr13:74642705(-) A-I      intronic chr13:74640630(-) A-I      intronic chr13:74640626(-) A-I      intronic chr13:74616389(-) A-I      intronic chr13:74616261(-) A-I      intronic chr13:74522444(-) A-I      intronic chr13:74522424(-) A-I      intronic chr13:74521705(-) A-I      intronic chr13:74280126(-) A-I      intronic chr13:74521616(-) A-I      intronic chr13:74532652(-) A-I      intronic chr13:74522556(-) A-I      intronic chr13:74379653(-) A-I      intronic chr13:74379716(-) A-I      intronic chr13:74482787(-) A-I      intronic chr13:74482427(-) A-I      intronic chr13:74351762(-) A-I      intronic chr13:74522564(-) A-I      intronic chr13:74385393(-) A-I      intronic chr13:74482788(-) A-I      intronic chr13:74401213(-) A-I      intronic chr13:74442117(-) A-I      intronic chr13:74482755(-) A-I      intronic chr13:74399042(-) A-I      intronic chr13:74509984(-) A-I      intronic chr13:74379645(-) A-I      intronic chr13:74381424(-) A-I      intronic chr13:74381187(-) A-I      intronic chr13:74668875(-) A-I      intronic chr13:74399057(-) A-I      intronic chr13:74581534(-) A-I      intronic chr13:74385394(-) A-I      intronic chr13:74352077(-) A-I      intronic chr13:74486839(-) A-I      intronic chr13:74442095(-) A-I      intronic chr13:74642696(-) A-I      intronic chr13:74442757(-) A-I      intronic chr13:74426766(-) A-I      intronic chr13:74381389(-) A-I      intronic chr13:74359488(-) A-I      intronic chr13:74313250(-) A-I      intronic chr13:74376719(-) A-I      intronic chr13:74511202(-) A-I      intronic chr13:74442624(-) A-I      intronic chr13:74666072(-) A-I      intronic chr13:74581520(-) A-I      intronic chr13:74482859(-) A-I      intronic chr13:74664579(-) A-I      intronic chr13:74279689(-) A-I      intronic chr13:74642822(-) A-I      intronic chr13:74665999(-) A-I      intronic chr13:74427285(-) A-I      intronic chr13:74360940(-) A-I      intronic chr13:74426802(-) A-I      intronic chr13:74360976(-) A-I      intronic chr13:74352679(-) A-I      intronic chr13:74352676(-) A-I      intronic chr13:74664525(-) A-I      intronic chr13:74654073(-) A-I      intronic chr13:74312492(-) A-I      intronic chr13:74509862(-) A-I      intronic chr13:74398047(-) A-I      intronic chr13:74385350(-) A-I      intronic chr13:74501781(-) A-I      intronic chr13:74376743(-) A-I      intronic chr13:74380057(-) A-I      intronic chr13:74379552(-) A-I      intronic chr13:74522432(-) A-I      intronic chr13:74666035(-) A-I      intronic chr13:74522588(-) A-I      intronic chr13:74442210(-) A-I      intronic chr13:74399001(-) A-I      intronic chr13:74482456(-) A-I      intronic chr13:74373318(-) A-I      intronic chr13:74489109(-) A-I      intronic chr13:74642844(-) A-I      intronic chr13:74361005(-) A-I      intronic chr13:74509838(-) A-I      intronic chr13:74666023(-) A-I      intronic chr13:74384138(-) A-I      intronic chr13:74509893(-) A-I      intronic chr13:74398042(-) A-I      intronic chr13:74426892(-) A-I      intronic chr13:74361048(-) A-I      intronic chr13:74462316(-) A-I      intronic chr13:74379670(-) A-I      intronic chr13:74359390(-) A-I      intronic chr13:74666036(-) A-I      intronic chr13:74621539(-) A-I      intronic chr13:74632215(-) A-I      intronic chr13:74442111(-) A-I      intronic chr13:74380352(-) A-I      intronic chr13:74521596(-) A-I      intronic chr13:74380434(-) A-I      intronic chr13:74482416(-) A-I      intronic chr13:74645708(-) A-I      intronic chr13:74358905(-) A-I      intronic chr13:74509977(-) A-I      intronic chr13:74354767(-) A-I      intronic chr13:74427764(-) A-I      intronic chr13:74368541(-) A-I      intronic chr13:74376742(-) A-I      intronic chr13:74482791(-) A-I      intronic chr13:74511227(-) A-I      intronic chr13:74313154(-) A-I      intronic chr13:74442710(-) A-I      intronic chr13:74608190(-) A-I      intronic chr13:74360757(-) A-I      intronic chr13:74380058(-) A-I      intronic chr13:74379585(-) A-I      intronic chr13:74379629(-) A-I      intronic chr13:74482903(-) A-I      intronic chr13:74380423(-) A-I      intronic chr13:74645828(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	KLF12	chr13:74665999(-) A-I intron -    15342557 chr13:74666035(-) A-I intron -    15342557 chr13:74666036(-) A-I intron -    15342557 chr13:74666072(-) A-I intron -    15342557 chr13:74666326(-) A-I intron -    15342557 chr13:74664525(-) A-G intron -    22484847 chr13:74664579(-) A-G intron -    22484847 chr13:74666023(-) A-G intron -    22484847 chr13:74666035(-) A-G intron -    22484847 chr13:74666036(-) A-G intron -    22484847 chr13:74511227(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KLF12	chr13:74263469-74263470(-) m6A 3'UTR       27773535 chr13:74263484-74263485(-) m6A 3'UTR       27773535 chr13:74263495-74263496(-) m6A 3'UTR       27773535 chr13:74263571-74263572(-) m6A 3'UTR       27773535 chr13:74263955-74263956(-) m6A 3'UTR       27773535 chr13:74264281-74264282(-) m6A 3'UTR       27773535 chr13:74264306-74264307(-) m6A 3'UTR       27773535 chr13:74264362-74264363(-) m6A 3'UTR       27773535 chr13:74268094-74268095(-) m6A 3'UTR       - chr13:74268159-74268160(-) m6A 3'UTR       - chr13:74268411-74268412(-) m6A 3'UTR       27773535 chr13:74268534-74268535(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr13:74268578-74268579(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr13:74268604-74268605(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74268663-74268664(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74268669-74268670(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74268677-74268678(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr13:74268727-74268728(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr13:74268737-74268738(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr13:74268751-74268752(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr13:74268830-74268831(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr13:74268879-74268880(-) m6A 3'UTR       24284625//22608085 chr13:74269170-74269171(-) m6A 3'UTR       24981863//27773535//22608085 chr13:74269256-74269257(-) m6A 3'UTR       24981863//27773535//22608085 chr13:74269313-74269314(-) m6A 3'UTR       24981863//27773535//22608085 chr13:74269388-74269389(-) m6A 3'UTR       24284625//24981863//27773535//27371828//22608085 chr13:74269436-74269437(-) m6A 3'UTR       24284625//24981863//27773535//27371828//27773536//22608085 chr13:74269504-74269505(-) m6A 3'UTR       24284625//24981863//27773535//27773536//22608085 chr13:74269693-74269694(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr13:74269725-74269726(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr13:74269746-74269747(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr13:74269800-74269801(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr13:74289513-74289514(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr13:74289602-74289603(-) m6A CDS       27773535 chr13:74387028-74387029(-) m6A exon//intron       27773535 chr13:74387072-74387073(-) m6A exon//intron       27773535 chr13:74387392-74387393(-) m6A CDS//exon       27773535 chr13:74387414-74387415(-) m6A CDS//exon       27773535 chr13:74420013-74420014(-) m6A CDS//exon       24981863//27773535 chr13:74420096-74420097(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr13:74420373-74420374(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74420385-74420386(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74420398-74420399(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74420404-74420405(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74420430-74420431(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr13:74518123-74518124(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr13:74518143-74518144(-) m6A CDS//exon       24284625//27773535//22608085 chr13:74518187-74518188(-) m6A 5'UTR//CDS//exon       27773535//22608085 chr13:74569134-74569135(-) m6A 5'UTR//CDS//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	KLF12	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: KLF12

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg