Basic Information:

  VIRBase ID:  

VHID00668292

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          ABHD2:  NM_007011     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	ABHD2
miRBase Accession/Entrez ID	MIMAT0009147	11057
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HS1-2//LABH2//PHPS1-2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ABHD2	chr15:89744316(+) A-I      3'UTR chr15:89743928(+) A-I      3'UTR chr15:89743918(+) A-I      3'UTR chr15:89743911(+) A-I      3'UTR chr15:89743899(+) A-I      3'UTR chr15:89743898(+) A-I      3'UTR chr15:89743897(+) A-I      3'UTR chr15:89744506(+) A-I      3'UTR chr15:89744485(+) A-I      3'UTR chr15:89743861(+) A-I      3'UTR chr15:89743939(+) A-I      3'UTR chr15:89743943(+) A-I      3'UTR chr15:89743944(+) A-I      3'UTR chr15:89744359(+) A-I      3'UTR chr15:89744059(+) A-I      3'UTR chr15:89744362(+) A-I      3'UTR chr15:89744040(+) A-I      3'UTR chr15:89744374(+) A-I      3'UTR chr15:89744834(+) A-I      3'UTR chr15:89744527(+) A-I      3'UTR chr15:89744042(+) A-I      3'UTR chr15:89744859(+) A-I      3'UTR chr15:89744550(+) A-I      3'UTR chr15:89744875(+) A-I      3'UTR chr15:89744888(+) A-I      3'UTR chr15:89744514(+) A-I      3'UTR chr15:89744890(+) A-I      3'UTR chr15:89744870(+) A-I      3'UTR chr15:89651696(+) A-I      intronic chr15:89744058(+) A-I      3'UTR chr15:89743863(+) A-I      3'UTR chr15:89744541(+) A-I      3'UTR chr15:89743867(+) A-I      3'UTR chr15:89743868(+) A-I      3'UTR chr15:89743935(+) A-I      3'UTR chr15:89744371(+) A-I      3'UTR chr15:89743850(+) A-I      3'UTR chr15:89743858(+) A-I      3'UTR chr15:89743862(+) A-I      3'UTR chr15:89743832(+) A-I      3'UTR chr15:89743848(+) A-I      3'UTR chr15:89743869(+) A-I      3'UTR chr15:89743851(+) A-I      3'UTR chr15:89743895(+) A-I      3'UTR chr15:89743896(+) A-I      3'UTR chr15:89744889(+) A-I      3'UTR chr15:89641161(+) A-I      intronic chr15:89641234(+) A-I      intronic chr15:89686761(+) A-I      intronic chr15:89641363(+) A-I      intronic chr15:89691242(+) A-I      intronic chr15:89642551(+) A-I      intronic chr15:89642630(+) A-I      intronic chr15:89642635(+) A-I      intronic chr15:89643536(+) A-I      intronic chr15:89643538(+) A-I      intronic chr15:89643572(+) A-I      intronic chr15:89699469(+) A-I      intronic chr15:89649281(+) A-I      intronic chr15:89649295(+) A-I      intronic chr15:89649325(+) A-I      intronic chr15:89649349(+) A-I      intronic chr15:89667965(+) A-I      intronic chr15:89667968(+) A-I      intronic chr15:89699518(+) A-I      intronic chr15:89690678(+) A-I      intronic chr15:89699534(+) A-I      intronic chr15:89699537(+) A-I      intronic chr15:89667974(+) A-I      intronic chr15:89668366(+) A-I      intronic chr15:89699551(+) A-I      intronic chr15:89699749(+) A-I      intronic chr15:89699776(+) A-I      intronic chr15:89699800(+) A-I      intronic chr15:89699801(+) A-I      intronic chr15:89701034(+) A-I      intronic chr15:89712344(+) A-I      intronic chr15:89641331(+) A-I      intronic chr15:89714292(+) A-I      intronic chr15:89637719(+) A-I      intronic chr15:89637888(+) A-I      intronic chr15:89638204(+) A-I      intronic chr15:89638210(+) A-I      intronic chr15:89718581(+) A-I      intronic chr15:89718487(+) A-I      intronic chr15:89699802(+) A-I      intronic chr15:89641153(+) A-I      intronic chr15:89644006(+) A-I      intronic chr15:89641196(+) A-I      intronic chr15:89642746(+) A-I      intronic chr15:89643540(+) A-I      intronic chr15:89684473(+) A-I      intronic chr15:89686823(+) A-I      intronic chr15:89667101(+) A-I      intronic chr15:89642649(+) A-I      intronic chr15:89642793(+) A-I      intronic chr15:89708782(+) A-I      intronic chr15:89702169(+) A-I      intronic chr15:89641201(+) A-I      intronic chr15:89684721(+) A-I      intronic chr15:89668241(+) A-I      intronic chr15:89684608(+) A-I      intronic chr15:89644021(+) A-I      intronic chr15:89684472(+) A-I      intronic chr15:89700806(+) A-I      intronic chr15:89699736(+) A-I      intronic chr15:89699799(+) A-I      intronic chr15:89642741(+) A-I      intronic chr15:89702078(+) A-I      intronic chr15:89691230(+) A-I      intronic chr15:89687465(+) A-I      intronic chr15:89641215(+) A-I      intronic chr15:89643090(+) A-I      intronic chr15:89715064(+) A-I      intronic chr15:89666860(+) A-I      intronic chr15:89735789(+) A-I      intronic chr15:89643575(+) A-I      intronic chr15:89642831(+) A-I      intronic chr15:89684403(+) A-I      intronic chr15:89637436(+) A-I      intronic chr15:89691257(+) A-I      intronic chr15:89649147(+) A-I      intronic chr15:89641186(+) A-I      intronic chr15:89684601(+) A-I      intronic chr15:89641311(+) A-I      intronic chr15:89638198(+) A-I      intronic chr15:89641255(+) A-I      intronic chr15:89643061(+) A-I      intronic chr15:89636944(+) A-I      intronic chr15:89699862(+) A-I      intronic chr15:89650035(+) A-I      intronic chr15:89714304(+) A-I      intronic chr15:89638244(+) A-I      intronic chr15:89699477(+) A-I      intronic chr15:89665139(+) A-I      intronic chr15:89702142(+) A-I      intronic chr15:89667100(+) A-I      intronic chr15:89684743(+) A-I      intronic chr15:89687434(+) A-I      intronic chr15:89642597(+) A-I      intronic chr15:89686904(+) A-I      intronic chr15:89638245(+) A-I      intronic chr15:89643548(+) A-I      intronic chr15:89713605(+) A-I      intronic chr15:89650054(+) A-I      intronic chr15:89643586(+) A-I      intronic chr15:89702002(+) A-I      intronic chr15:89691229(+) A-I      intronic chr15:89668380(+) A-I      intronic chr15:89714427(+) A-I      intronic chr15:89744192(+) A-I      3'UTR chr15:89739330(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ABHD2	chr15:89678913(+) A-I intron -    22327324 chr15:89678937(+) A-I intron -    22327324 chr15:89714427(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ABHD2	chr15:89631595-89631596(+) m6A 5'UTR//intron       24981863 chr15:89631749-89631750(+) m6A 5'UTR//exon//intron       24981863 chr15:89631754-89631755(+) m6A 5'UTR//exon//intron       24981863 chr15:89649582-89649583(+) m6A exon//intron       24981863 chr15:89649597-89649598(+) m6A exon//intron       24981863 chr15:89649611-89649612(+) m6A exon//intron       24981863 chr15:89698708-89698709(+) m6A CDS//exon       - chr15:89738663-89738664(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr15:89739607-89739608(+) m6A 3'UTR       24981863 chr15:89739622-89739623(+) m6A 3'UTR       24981863 chr15:89739652-89739653(+) m6A 3'UTR       24981863 chr15:89739658-89739659(+) m6A 3'UTR       24981863 chr15:89740120-89740121(+) m6A 3'UTR       24981863 chr15:89740134-89740135(+) m6A 3'UTR       24981863 chr15:89740157-89740158(+) m6A 3'UTR       24981863 chr15:89740162-89740163(+) m6A 3'UTR       24981863 chr15:89740167-89740168(+) m6A 3'UTR       24981863//22608085 chr15:89740235-89740236(+) m6A 3'UTR       24981863//22608085 chr15:89741567-89741568(+) m6A 3'UTR       26404942 chr15:89742528-89742529(+) Am 3'UTR       - chr15:89742769-89742770(+) m6A 3'UTR       - chr15:89742852-89742853(+) m6A 3'UTR       - chr15:89743577-89743578(+) m6A 3'UTR       24209618 chr15:89743617-89743618(+) m6A 3'UTR       24209618 chr15:89743695-89743696(+) m6A 3'UTR       24209618 chr15:89743733-89743734(+) m6A 3'UTR       24209618 chr15:89743759-89743760(+) m6A 3'UTR       24209618 chr15:89744136-89744137(+) m6A 3'UTR       24981863 chr15:89744233-89744234(+) m6A 3'UTR       24981863 chr15:89744303-89744304(+) m6A 3'UTR       24981863 chr15:89744986-89744987(+) m6A 3'UTR       - chr15:89745040-89745041(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	ABHD2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: ABHD2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg