Basic Information:

  VIRBase ID:  

VHID00668039

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          TBKBP1:  NM_014726     

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Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	TBKBP1
miRBase Accession/Entrez ID	MIMAT0009147	9755
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ProSAPiP2//SINTBAD

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TBKBP1	chr17:45772857-45772858(+) m6A 5'UTR//intron       25456834 chr17:45772907-45772908(+) m6A 5'UTR//intron       25456834 chr17:45774541-45774542(+) m6A CDS       24209618 chr17:45776096-45776097(+) m6A CDS//intron       - chr17:45776849-45776850(+) m6A CDS//intron       24209618//24981863 chr17:45777029-45777030(+) m6A CDS//intron       24209618//24981863 chr17:45785847-45785848(+) m6A CDS//intron       24209618 chr17:45785861-45785862(+) m6A CDS//intron       24209618 chr17:45787955-45787956(+) m6A 3'UTR//CDS       24981863 chr17:45787978-45787979(+) m6A 3'UTR//CDS       24981863 chr17:45788044-45788045(+) m6A 3'UTR       24284625//24981863 chr17:45788932-45788933(+) Y 3'UTR       26075521 chr17:45789382-45789383(+) m6A 3'UTR       24981863 chr17:45789404-45789405(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	TBKBP1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: TBKBP1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg