Basic Information:

  VIRBase ID:  

VHID00667927

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          DLGAP2:  NR_073397     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	DLGAP2
miRBase Accession/Entrez ID	MIMAT0009147	9228
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C8orf68//DAP2//ERICH1-AS1//SAPAP2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DLGAP2	chr8:1629717(+) A-I      intronic chr8:1628056(+) A-I      intronic chr8:1628058(+) A-I      intronic chr8:1629695(+) A-I      intronic chr8:1630741(+) A-I      intronic chr8:1630758(+) A-I      intronic chr8:1638289(+) A-I      intronic chr8:1638447(+) A-I      intronic chr8:1630766(+) A-I      intronic chr8:1638853(+) A-I      intronic chr8:1630770(+) A-I      intronic chr8:1628026(+) A-I      intronic chr8:1630780(+) A-I      intronic chr8:1634601(+) A-I      intronic chr8:1496474(+) A-I      intronic chr8:1629589(+) A-I      intronic chr8:1536954(+) A-I      intronic chr8:1634733(+) A-I      intronic chr8:1632242(+) A-I      intronic chr8:1630914(+) A-I      intronic chr8:1630790(+) A-I      intronic chr8:1537834(+) A-I      intronic chr8:1638424(+) A-I      intronic chr8:1595576(+) A-I      intronic chr8:1536968(+) A-I      intronic chr8:1629617(+) A-I      intronic chr8:1630920(+) A-I      intronic chr8:1629725(+) A-I      intronic chr8:1630697(+) A-I      intronic chr8:1630855(+) A-I      intronic chr8:1537670(+) A-I      intronic chr8:1536946(+) A-I      intronic chr8:1629814(+) A-I      intronic chr8:1627969(+) A-I      intronic chr8:1629549(+) A-I      intronic chr8:1543396(+) A-I      intronic chr8:1638497(+) A-I      intronic chr8:1630840(+) A-I      intronic chr8:1537672(+) A-I      intronic chr8:1629613(+) A-I      intronic chr8:1492132(+) A-I      intronic chr8:1638487(+) A-I      intronic chr8:1543372(+) A-I      intronic chr8:1630875(+) A-I      intronic chr8:1630820(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DLGAP2	chr8:1626548-1626549(+) m6A CDS//exon       25456834 chr8:1626557-1626558(+) m6A CDS//exon       25456834 chr8:1626585-1626586(+) m6A CDS//exon       25456834 chr8:1626593-1626594(+) m6A CDS//exon       25456834 chr8:1626603-1626604(+) m6A CDS//exon       25456834 chr8:1626627-1626628(+) m6A CDS//exon       25456834 chr8:1626662-1626663(+) m6A CDS//exon       25456834 chr8:1626725-1626726(+) m6A CDS//exon       25456834 chr8:1649432-1649433(+) m6A CDS       25456834 chr8:1649445-1649446(+) m6A CDS       25456834 chr8:1649528-1649529(+) m6A CDS       25456834 chr8:1649560-1649561(+) m6A CDS       25456834 chr8:1649670-1649671(+) m6A 3'UTR       25456834 chr8:1649704-1649705(+) m6A 3'UTR       25456834 chr8:1649823-1649824(+) m6A 3'UTR       25456834 chr8:1649837-1649838(+) m6A 3'UTR       25456834 chr8:1649893-1649894(+) m6A 3'UTR       25456834 chr8:1650003-1650004(+) m6A 3'UTR       25456834 chr8:1650125-1650126(+) m6A 3'UTR       25456834 chr8:1650132-1650133(+) m6A 3'UTR       25456834 chr8:1650238-1650239(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	DLGAP2	Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: DLGAP2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg