Basic Information:

  VIRBase ID:  

VHID00667743

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          ZNF230:  NM_006300     

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Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	ZNF230
miRBase Accession/Entrez ID	MIMAT0009147	7773
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FDZF2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF230	chr19:44507176-44507177(+) m6A 5'UTR//exon       24981863 chr19:44513002-44513003(+) m6A CDS       - chr19:44513044-44513045(+) m6A CDS       - chr19:44514428-44514429(+) m6A 3'UTR//CDS       25456834//24981863//22608085 chr19:44514445-44514446(+) m6A 3'UTR//CDS       25456834//24981863//22608085 chr19:44514456-44514457(+) m6A 3'UTR//CDS       25456834//24981863//22608085 chr19:44514481-44514482(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22608085 chr19:44514513-44514514(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22608085 chr19:44514544-44514545(+) m6A 3'UTR//CDS       24209618//24981863//22608085 chr19:44514577-44514578(+) m6A 3'UTR//CDS       24209618//24981863//22608085 chr19:44514598-44514599(+) m6A 3'UTR//CDS       24209618//24981863//22608085 chr19:44514604-44514605(+) m6A 3'UTR//CDS       24209618//24981863//22608085 chr19:44514628-44514629(+) m6A 3'UTR//CDS       24209618//24981863//22608085 chr19:44514772-44514773(+) m6A 3'UTR//CDS       24209618//22608085 chr19:44514827-44514828(+) m6A 3'UTR//CDS       22608085 chr19:44514856-44514857(+) m6A 3'UTR//CDS       22608085 chr19:44514940-44514941(+) m6A 3'UTR//CDS       24284625//22608085 chr19:44514997-44514998(+) m6A 3'UTR//CDS       24284625//22608085 chr19:44515108-44515109(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr19:44515186-44515187(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr19:44515192-44515193(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr19:44515276-44515277(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr19:44515360-44515361(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22608085 chr19:44515426-44515427(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr19:44515444-44515445(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr19:44515500-44515501(+) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr19:44515512-44515513(+) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr19:44515527-44515528(+) m6A 3'UTR//CDS       24981863//22608085 chr19:44515545-44515546(+) m6A 3'UTR//CDS       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	ZNF230	Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: ZNF230

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg