Basic Information:

  VIRBase ID:  

VHID00667689

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          UBE3A:  NR_148916     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	UBE3A
miRBase Accession/Entrez ID	MIMAT0009147	7337
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ANCR//AS//E6-AP//EPVE6AP//HPVE6A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	UBE3A	chr15:25682528(-) A-I      intronic chr15:25610813(-) A-I      intronic chr15:25586871(-) A-I      intronic chr15:25682577(-) A-I      intronic chr15:25682558(-) A-I      intronic chr15:25586828(-) A-I      intronic chr15:25667001(-) A-I      intronic chr15:25682537(-) A-I      intronic chr15:25586895(-) A-I      intronic chr15:25682529(-) A-I      intronic chr15:25682533(-) A-I      intronic chr15:25682571(-) A-I      intronic chr15:25682576(-) A-I      intronic chr15:25610065(-) A-I      intronic chr15:25610783(-) A-I      intronic chr15:25610746(-) A-I      intronic chr15:25610706(-) A-I      intronic chr15:25610066(-) A-I      intronic chr15:25610044(-) A-I      intronic chr15:25610012(-) A-I      intronic chr15:25609896(-) A-I      intronic chr15:25609887(-) A-I      intronic chr15:25609333(-) A-I      intronic chr15:25609278(-) A-I      intronic chr15:25609265(-) A-I      intronic chr15:25609251(-) A-I      intronic chr15:25609156(-) A-I      intronic chr15:25609095(-) A-I      intronic chr15:25609094(-) A-I      intronic chr15:25606543(-) A-I      intronic chr15:25606411(-) A-I      intronic chr15:25606397(-) A-I      intronic chr15:25674916(-) A-I      intronic chr15:25603463(-) A-I      intronic chr15:25603274(-) A-I      intronic chr15:25603422(-) A-I      intronic chr15:25603411(-) A-I      intronic chr15:25603402(-) A-I      intronic chr15:25603370(-) A-I      intronic chr15:25603307(-) A-I      intronic chr15:25672100(-) A-I      intronic chr15:25603273(-) A-I      intronic chr15:25603261(-) A-I      intronic chr15:25675070(-) A-I      intronic chr15:25586284(-) A-I      intronic chr15:25602788(-) A-I      intronic chr15:25586292(-) A-I      intronic chr15:25602721(-) A-I      intronic chr15:25672933(-) A-I      intronic chr15:25602672(-) A-I      intronic chr15:25602665(-) A-I      intronic chr15:25602663(-) A-I      intronic chr15:25586293(-) A-I      intronic chr15:25679095(-) A-I      intronic chr15:25602662(-) A-I      intronic chr15:25586395(-) A-I      intronic chr15:25597320(-) A-I      intronic chr15:25586309(-) A-I      intronic chr15:25597285(-) A-I      intronic chr15:25678505(-) A-I      intronic chr15:25668093(-) A-I      intronic chr15:25676550(-) A-I      intronic chr15:25586345(-) A-I      intronic chr15:25586422(-) A-I      intronic chr15:25597279(-) A-I      intronic chr15:25672855(-) A-I      intronic chr15:25672178(-) A-I      intronic chr15:25597259(-) A-I      intronic chr15:25678614(-) A-I      intronic chr15:25674812(-) A-I      intronic chr15:25586469(-) A-I      intronic chr15:25586490(-) A-I      intronic chr15:25586491(-) A-I      intronic chr15:25597220(-) A-I      intronic chr15:25679203(-) A-I      intronic chr15:25586879(-) A-I      intronic chr15:25676717(-) A-I      intronic chr15:25597194(-) A-I      intronic chr15:25679105(-) A-I      intronic chr15:25597179(-) A-I      intronic chr15:25586654(-) A-I      intronic chr15:25597137(-) A-I      intronic chr15:25676703(-) A-I      intronic chr15:25597136(-) A-I      intronic chr15:25676685(-) A-I      intronic chr15:25676684(-) A-I      intronic chr15:25676683(-) A-I      intronic chr15:25609310(-) A-I      intronic chr15:25597129(-) A-I      intronic chr15:25676672(-) A-I      intronic chr15:25676669(-) A-I      intronic chr15:25676667(-) A-I      intronic chr15:25597066(-) A-I      intronic chr15:25586748(-) A-I      intronic chr15:25676666(-) A-I      intronic chr15:25676657(-) A-I      intronic chr15:25676628(-) A-I      intronic chr15:25676579(-) A-I      intronic chr15:25676501(-) A-I      intronic chr15:25586786(-) A-I      intronic chr15:25668135(-) A-I      intronic chr15:25676496(-) A-I      intronic chr15:25675020(-) A-I      intronic chr15:25586793(-) A-I      intronic chr15:25674995(-) A-I      intronic chr15:25674986(-) A-I      intronic chr15:25674807(-) A-I      intronic chr15:25672856(-) A-I      intronic chr15:25672136(-) A-I      intronic chr15:25596819(-) A-I      intronic chr15:25586798(-) A-I      intronic chr15:25602620(-) A-I      intronic chr15:25596799(-) A-I      intronic chr15:25596684(-) A-I      intronic chr15:25586848(-) A-I      intronic chr15:25596794(-) A-I      intronic chr15:25596714(-) A-I      intronic chr15:25675069(-) A-I      intronic chr15:25674778(-) A-I      intronic chr15:25602664(-) A-I      intronic chr15:25672132(-) A-I      intronic chr15:25586745(-) A-I      intronic chr15:25672049(-) A-I      intronic chr15:25672042(-) A-I      intronic chr15:25610857(-) A-I      intronic chr15:25610848(-) A-I      intronic chr15:25610819(-) A-I      intronic chr15:25610808(-) A-I      intronic chr15:25648895(-) A-I      intronic chr15:25681878(-) A-I      intronic chr15:25643704(-) A-I      intronic chr15:25643791(-) A-I      intronic chr15:25682454(-) A-I      intronic chr15:25676763(-) A-I      intronic chr15:25681882(-) A-I      intronic chr15:25681879(-) A-I      intronic chr15:25610691(-) A-I      intronic chr15:25676618(-) A-I      intronic chr15:25678495(-) A-I      intronic chr15:25682562(-) A-I      intronic chr15:25682516(-) A-I      intronic chr15:25610832(-) A-I      intronic chr15:25676762(-) A-I      intronic chr15:25678446(-) A-I      intronic chr15:25675030(-) A-I      intronic chr15:25596849(-) A-I      intronic chr15:25668129(-) A-I      intronic chr15:25609994(-) A-I      intronic chr15:25681644(-) A-I      intronic chr15:25643690(-) A-I      intronic chr15:25675040(-) A-I      intronic chr15:25675144(-) A-I      intronic chr15:25672038(-) A-I      intronic chr15:25676660(-) A-I      intronic chr15:25682515(-) A-I      intronic chr15:25681883(-) A-I      intronic chr15:25586858(-) A-I      intronic chr15:25586788(-) A-I      intronic chr15:25672062(-) A-I      intronic chr15:25681815(-) A-I      intronic chr15:25678498(-) A-I      intronic chr15:25643811(-) A-I      intronic chr15:25674810(-) A-I      intronic chr15:25676575(-) A-I      intronic chr15:25602581(-) A-I      intronic chr15:25609350(-) A-I      intronic chr15:25676586(-) A-I      intronic chr15:25674948(-) A-I      intronic chr15:25674949(-) A-I      intronic chr15:25676595(-) A-I      intronic chr15:25682532(-) A-I      intronic chr15:25679090(-) A-I      intronic chr15:25676552(-) A-I      intronic chr15:25679157(-) A-I      intronic chr15:25602733(-) A-I      intronic chr15:25643779(-) A-I      intronic chr15:25678459(-) A-I      intronic chr15:25679092(-) A-I      intronic chr15:25674941(-) A-I      intronic chr15:25602671(-) A-I      intronic chr15:25669253(-) A-I      intronic chr15:25602765(-) A-I      intronic chr15:25672133(-) A-I      intronic chr15:25597260(-) A-I      intronic chr15:25678972(-) A-I      intronic chr15:25586420(-) A-I      intronic chr15:25609318(-) A-I      intronic chr15:25676668(-) A-I      intronic chr15:25596749(-) A-I      intronic chr15:25674803(-) A-I      intronic chr15:25610727(-) A-I      intronic chr15:25682468(-) A-I      intronic chr15:25644962(-) A-I      intronic chr15:25596781(-) A-I      intronic chr15:25672013(-) A-I      intronic chr15:25678469(-) A-I      intronic chr15:25672031(-) A-I      intronic chr15:25668062(-) A-I      intronic chr15:25674917(-) A-I      intronic chr15:25643827(-) A-I      intronic chr15:25602588(-) A-I      intronic chr15:25674827(-) A-I      intronic chr15:25643789(-) A-I      intronic chr15:25643708(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	UBE3A	chr15:25681838(-) A-I intron -    21960545 chr15:25681848(-) A-I intron -    21960545 chr15:25648895(-) A-G intron -    22484847 chr15:25669253(-) A-G intron -    22484847 chr15:25676586(-) A-G intron -    22484847 chr15:25681815(-) A-G intron -    22484847 chr15:25682516(-) A-G intron -    22484847 chr15:25682532(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	UBE3A	chr15:25584063-25584064(-) m6A 3'UTR       27773535 chr15:25584089-25584090(-) m6A 3'UTR       27773535 chr15:25584103-25584104(-) m6A 3'UTR       27773535 chr15:25584261-25584262(-) m6A 3'UTR       24981863//27773535//22608085 chr15:25584271-25584272(-) m6A 3'UTR       24981863//27773535//22608085 chr15:25584276-25584277(-) m6A 3'UTR       24981863//27773535//22608085 chr15:25584281-25584282(-) m6A 3'UTR       24981863//27773535//22608085 chr15:25584340-25584341(-) m6A CDS       24981863//27773535//22608085 chr15:25585240-25585241(-) m6A CDS       24981863//27773535//22608085 chr15:25585281-25585282(-) m6A CDS       24981863//27773535 chr15:25585300-25585301(-) m6A CDS       24981863//27773535 chr15:25585329-25585330(-) m6A CDS       24981863 chr15:25599514-25599515(-) m6A CDS       27773535 chr15:25599545-25599546(-) m6A CDS       27773535 chr15:25599710-25599711(-) m6A CDS//exon//intron       27773535 chr15:25599779-25599780(-) m6A CDS//exon//intron       27773535 chr15:25605605-25605606(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr15:25605642-25605643(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:25615757-25615758(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:25615781-25615782(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:25615911-25615912(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr15:25615918-25615919(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr15:25615973-25615974(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr15:25616006-25616007(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr15:25616023-25616024(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr15:25616036-25616037(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr15:25616041-25616042(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr15:25616052-25616053(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr15:25616073-25616074(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr15:25616096-25616097(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr15:25616163-25616164(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr15:25616305-25616306(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr15:25616328-25616329(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr15:25616351-25616352(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr15:25616360-25616361(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr15:25616569-25616570(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr15:25616667-25616668(-) m6A CDS//exon       24284625//24209618//24981863//22608085 chr15:25616712-25616713(-) m6A CDS//exon       24284625//24981863//22608085 chr15:25616769-25616770(-) m6A CDS//exon       24981863 chr15:25616798-25616799(-) m6A CDS//exon       24981863 chr15:25616816-25616817(-) m6A CDS//exon       24981863 chr15:25620640-25620641(-) m6A CDS//exon       24981863 chr15:25620685-25620686(-) m6A CDS//exon       24981863 chr15:25620738-25620739(-) m6A CDS//intron       24981863 chr15:25683851-25683852(-) m6A 5'UTR       27773536 chr15:25684062-25684063(-) m6A 5'UTR       24284625//24981863//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	UBE3A	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: UBE3A

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg