Detail Information

Basic Information:


  VIRBase ID:  

VHID00667667

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:           TOP3A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol jcv-miR-J1-5p TOP3A
miRBase
Accession/Entrez ID
MIMAT0009147 7156
Organism JC polyomavirus (JCPyV) Homo sapiens
Category miRNA mRNA
Alias - MGRISCE2//PEOB5//TOP3//ZGRF7

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TOP3A
chr17:18178441(-) A-I      intronic
chr17:18178474(-) A-I      intronic
chr17:18178532(-) A-I      intronic
chr17:18178370(-) A-I      intronic
chr17:18209819(-) A-I      intronic
chr17:18209726(-) A-I      intronic
chr17:18209731(-) A-I      intronic
chr17:18178411(-) A-I      intronic
chr17:18177418(-) A-I      3'UTR
chr17:18209813(-) A-I      intronic
chr17:18178412(-) A-I      intronic
chr17:18209740(-) A-I      intronic
chr17:18177433(-) A-I      3'UTR
chr17:18177446(-) A-I      3'UTR
chr17:18177452(-) A-I      3'UTR
chr17:18178482(-) A-I      intronic
chr17:18209837(-) A-I      intronic
chr17:18200483(-) A-I      intronic
chr17:18209766(-) A-I      intronic
chr17:18191066(-) A-I      intronic
chr17:18209728(-) A-I      intronic
chr17:18209789(-) A-I      intronic
chr17:18209857(-) A-I      intronic
chr17:18209895(-) A-I      intronic
chr17:18209920(-) A-I      intronic
chr17:18209931(-) A-I      intronic
chr17:18209947(-) A-I      intronic
chr17:18210714(-) A-I      intronic
chr17:18210731(-) A-I      intronic
chr17:18210748(-) A-I      intronic
chr17:18210830(-) A-I      intronic
chr17:18212774(-) A-I      intronic
chr17:18212858(-) A-I      intronic
chr17:18212876(-) A-I      intronic
chr17:18213152(-) A-I      intronic
chr17:18213162(-) A-I      intronic
chr17:18213172(-) A-I      intronic
chr17:18213188(-) A-I      intronic
chr17:18213196(-) A-I      intronic
chr17:18213219(-) A-I      intronic
chr17:18213303(-) A-I      intronic
chr17:18203608(-) A-I      intronic
chr17:18203584(-) A-I      intronic
chr17:18199746(-) A-I      intronic
chr17:18199731(-) A-I      intronic
chr17:18199251(-) A-I      intronic
chr17:18199019(-) A-I      intronic
chr17:18198694(-) A-I      intronic
chr17:18198658(-) A-I      intronic
chr17:18198657(-) A-I      intronic
chr17:18198581(-) A-I      intronic
chr17:18197105(-) A-I      intronic
chr17:18197104(-) A-I      intronic
chr17:18192903(-) A-I      intronic
chr17:18192693(-) A-I      intronic
chr17:18192682(-) A-I      intronic
chr17:18192491(-) A-I      intronic
chr17:18192487(-) A-I      intronic
chr17:18191212(-) A-I      intronic
chr17:18191200(-) A-I      intronic
chr17:18191164(-) A-I      intronic
chr17:18191139(-) A-I      intronic
chr17:18191065(-) A-I      intronic
chr17:18190918(-) A-I      intronic
chr17:18190906(-) A-I      intronic
chr17:18190796(-) A-I      intronic
chr17:18190757(-) A-I      intronic
chr17:18190697(-) A-I      intronic
chr17:18190656(-) A-I      intronic
chr17:18190604(-) A-I      intronic
chr17:18190349(-) A-I      intronic
chr17:18190276(-) A-I      intronic
chr17:18190188(-) A-I      intronic
chr17:18190183(-) A-I      intronic
chr17:18186601(-) A-I      intronic
chr17:18186600(-) A-I      intronic
chr17:18183337(-) A-I      intronic
chr17:18183299(-) A-I      intronic
chr17:18183293(-) A-I      intronic
chr17:18183285(-) A-I      intronic
chr17:18182970(-) A-I      intronic
chr17:18182949(-) A-I      intronic
chr17:18213511(-) A-I      intronic
chr17:18182842(-) A-I      intronic
chr17:18182836(-) A-I      intronic
chr17:18182765(-) A-I      intronic
chr17:18182748(-) A-I      intronic
chr17:18182703(-) A-I      intronic
chr17:18182126(-) A-I      intronic
chr17:18182112(-) A-I      intronic
chr17:18179236(-) A-I      intronic
chr17:18179233(-) A-I      intronic
chr17:18178467(-) A-I      intronic
chr17:18178450(-) A-I      intronic
chr17:18178415(-) A-I      intronic
chr17:18203625(-) A-I      intronic
chr17:18203645(-) A-I      intronic
chr17:18203689(-) A-I      intronic
chr17:18208894(-) A-I      intronic
chr17:18208963(-) A-I      intronic
chr17:18208979(-) A-I      intronic
chr17:18209028(-) A-I      intronic
chr17:18209130(-) A-I      intronic
chr17:18191637(-) A-I      intronic
chr17:18216372(-) A-I      intronic
chr17:18216324(-) A-I      intronic
chr17:18216205(-) A-I      intronic
chr17:18213658(-) A-I      intronic
chr17:18213628(-) A-I      intronic
chr17:18213618(-) A-I      intronic
chr17:18213576(-) A-I      intronic
chr17:18213559(-) A-I      intronic
chr17:18213547(-) A-I      intronic
chr17:18209259(-) A-I      intronic
chr17:18209394(-) A-I      intronic
chr17:18209399(-) A-I      intronic
chr17:18209463(-) A-I      intronic
chr17:18177277(-) A-I      3'UTR
chr17:18177428(-) A-I      3'UTR
chr17:18177467(-) A-I      3'UTR
chr17:18177247(-) A-I      3'UTR
chr17:18177366(-) A-I      3'UTR
chr17:18190468(-) A-I      intronic
chr17:18190655(-) A-I      intronic
chr17:18214426(-) A-I      intronic
chr17:18178388(-) A-I      intronic
chr17:18209841(-) A-I      intronic
chr17:18178465(-) A-I      intronic
chr17:18182881(-) A-I      intronic
chr17:18213229(-) A-I      intronic
chr17:18178376(-) A-I      intronic
chr17:18192811(-) A-I      intronic
chr17:18209479(-) A-I      intronic
chr17:18191731(-) A-I      intronic
chr17:18179170(-) A-I      intronic
chr17:18204046(-) A-I      intronic
chr17:18209150(-) A-I      intronic
chr17:18190455(-) A-I      intronic
chr17:18179035(-) A-I      intronic
chr17:18210800(-) A-I      intronic
chr17:18182739(-) A-I      intronic
chr17:18178516(-) A-I      intronic
chr17:18180243(-) A-I      intronic
chr17:18190370(-) A-I      intronic
chr17:18178812(-) A-I      intronic
chr17:18213270(-) A-I      intronic
chr17:18178949(-) A-I      intronic
chr17:18183308(-) A-I      intronic
chr17:18198969(-) A-I      intronic
chr17:18178389(-) A-I      intronic
chr17:18198904(-) A-I      intronic
chr17:18209944(-) A-I      intronic
chr17:18209796(-) A-I      intronic
chr17:18179144(-) A-I      intronic
chr17:18191148(-) A-I      intronic
chr17:18191643(-) A-I      intronic
chr17:18190591(-) A-I      intronic
chr17:18190718(-) A-I      intronic
chr17:18212927(-) A-I      intronic
chr17:18183139(-) A-I      intronic
chr17:18209434(-) A-I      intronic
chr17:18203589(-) A-I      intronic
chr17:18192759(-) A-I      intronic
chr17:18178556(-) A-I      intronic
chr17:18190666(-) A-I      intronic
chr17:18182843(-) A-I      intronic
chr17:18208896(-) A-I      intronic
chr17:18190630(-) A-I      intronic
chr17:18214811(-) A-I      intronic
chr17:18214705(-) A-I      intronic
chr17:18199887(-) A-I      intronic
chr17:18178506(-) A-I      intronic
chr17:18214768(-) A-I      intronic
chr17:18210656(-) A-I      intronic
chr17:18214826(-) A-I      intronic
chr17:18203975(-) A-I      intronic
chr17:18214494(-) A-I      intronic
chr17:18214605(-) A-I      intronic
chr17:18192423(-) A-I      intronic
chr17:18204018(-) A-I      intronic
chr17:18192782(-) A-I      intronic
chr17:18178538(-) A-I      intronic
chr17:18209773(-) A-I      intronic
chr17:18214696(-) A-I      intronic
chr17:18214857(-) A-I      intronic
chr17:18214595(-) A-I      intronic
chr17:18214803(-) A-I      intronic
chr17:18214586(-) A-I      intronic
chr17:18214509(-) A-I      intronic
chr17:18214587(-) A-I      intronic
chr17:18214593(-) A-I      intronic
chr17:18214609(-) A-I      intronic
chr17:18214453(-) A-I      intronic
chr17:18214479(-) A-I      intronic
chr17:18183165(-) A-I      intronic
chr17:18214796(-) A-I      intronic
chr17:18214840(-) A-I      intronic
chr17:18214827(-) A-I      intronic
chr17:18214519(-) A-I      intronic
chr17:18214772(-) A-I      intronic
chr17:18203455(-) A-I      intronic
chr17:18214542(-) A-I      intronic
chr17:18214412(-) A-I      intronic
chr17:18183078(-) A-I      intronic
chr17:18183141(-) A-I      intronic
chr17:18182709(-) A-I      intronic
chr17:18199143(-) A-I      intronic
chr17:18192387(-) A-I      intronic
chr17:18182908(-) A-I      intronic
chr17:18186623(-) A-I      intronic
chr17:18209953(-) A-I      intronic
chr17:18191102(-) A-I      intronic
chr17:18200687(-) A-I      intronic
chr17:18179108(-) A-I      intronic
chr17:18209792(-) A-I      intronic
chr17:18182871(-) A-I      intronic
chr17:18182049(-) A-I      intronic
chr17:18180459(-) A-I      intronic
chr17:18191058(-) A-I      intronic
chr17:18182180(-) A-I      intronic
chr17:18191103(-) A-I      intronic
chr17:18190477(-) A-I      intronic
chr17:18192824(-) A-I      intronic
chr17:18190783(-) A-I      intronic
chr17:18190764(-) A-I      intronic
chr17:18198968(-) A-I      intronic
chr17:18179010(-) A-I      intronic
chr17:18190280(-) A-I      intronic
chr17:18191145(-) A-I      intronic
chr17:18179241(-) A-I      intronic
chr17:18182900(-) A-I      intronic
chr17:18178679(-) A-I      intronic
chr17:18190935(-) A-I      intronic
chr17:18192722(-) A-I      intronic
chr17:18192464(-) A-I      intronic
chr17:18190603(-) A-I      intronic
chr17:18192766(-) A-I      intronic
chr17:18179242(-) A-I      intronic
chr17:18209404(-) A-I      intronic
chr17:18178695(-) A-I      intronic
chr17:18212835(-) A-I      intronic
chr17:18183419(-) A-I      intronic
chr17:18200700(-) A-I      intronic
chr17:18203694(-) A-I      intronic
chr17:18213664(-) A-I      intronic
chr17:18177460(-) A-I      3'UTR
chr17:18190437(-) A-I      intronic
chr17:18190371(-) A-I      intronic
chr17:18190660(-) A-I      intronic
chr17:18177532(-) A-I      3'UTR
chr17:18190826(-) A-I      intronic
chr17:18212845(-) A-I      intronic
chr17:18209885(-) A-I      intronic
chr17:18204045(-) A-I      intronic
chr17:18210764(-) A-I      intronic
chr17:18216180(-) A-I      intronic
chr17:18190680(-) A-I      intronic
chr17:18190788(-) A-I      intronic
chr17:18209739(-) A-I      intronic
chr17:18192692(-) A-I      intronic
chr17:18209918(-) A-I      intronic
chr17:18200591(-) A-I      intronic
chr17:18177483(-) A-I      3'UTR
chr17:18197808(-) A-I      intronic
chr17:18191052(-) A-I      intronic
chr17:18199210(-) A-I      intronic
chr17:18192851(-) A-I      intronic
chr17:18192424(-) A-I      intronic
chr17:18177415(-) A-I      3'UTR
chr17:18182287(-) A-I      intronic
chr17:18209089(-) A-I      intronic
chr17:18182059(-) A-I      intronic
chr17:18212875(-) A-I      intronic
chr17:18190540(-) A-I      intronic
chr17:18177524(-) A-I      3'UTR
chr17:18177362(-) A-I      3'UTR
chr17:18183206(-) A-I      intronic
chr17:18200568(-) A-I      intronic
chr17:18177411(-) A-I      3'UTR
chr17:18177348(-) A-I      3'UTR
chr17:18209746(-) A-I      intronic
chr17:18212844(-) A-I      intronic
chr17:18210723(-) A-I      intronic
chr17:18208908(-) A-I      intronic
chr17:18177469(-) A-I      3'UTR
chr17:18180255(-) A-I      intronic
chr17:18183365(-) A-I      intronic
chr17:18203669(-) A-I      intronic
chr17:18210812(-) A-I      intronic
chr17:18177444(-) A-I      3'UTR
chr17:18182872(-) A-I      intronic
chr17:18209881(-) A-I      intronic
chr17:18177430(-) A-I      3'UTR
chr17:18177389(-) A-I      3'UTR
chr17:18191686(-) A-I      intronic
chr17:18178948(-) A-I      intronic
chr17:18177478(-) A-I      3'UTR
chr17:18209821(-) A-I      intronic
chr17:18190268(-) A-I      intronic
chr17:18209930(-) A-I      intronic
chr17:18203962(-) A-I      intronic
chr17:18188420(-) A-I      intronic
chr17:18177327(-) A-I      3'UTR
chr17:18209508(-) A-I      intronic
chr17:18207367(-) A-I      intronic
chr17:18177540(-) A-I      3'UTR
chr17:18213737(-) A-I      intronic
chr17:18183093(-) A-I      intronic
chr17:18209806(-) A-I      intronic
chr17:18177429(-) A-I      3'UTR
chr17:18209886(-) A-I      intronic
chr17:18178561(-) A-I      intronic
chr17:18191064(-) A-I      intronic
chr17:18209407(-) A-I      intronic
chr17:18177375(-) A-I      3'UTR
chr17:18177425(-) A-I      3'UTR
chr17:18192810(-) A-I      intronic
chr17:18178504(-) A-I      intronic
chr17:18190683(-) A-I      intronic
chr17:18214850(-) A-I      intronic
chr17:18192473(-) A-I      intronic
chr17:18191229(-) A-I      intronic
chr17:18182984(-) A-I      intronic
chr17:18208923(-) A-I      intronic
chr17:18191196(-) A-I      intronic
chr17:18204047(-) A-I      intronic
chr17:18209734(-) A-I      intronic
chr17:18209416(-) A-I      intronic
chr17:18183462(-) A-I      intronic
chr17:18191735(-) A-I      intronic
chr17:18190930(-) A-I      intronic
chr17:18182050(-) A-I      intronic
chr17:18190947(-) A-I      intronic
chr17:18212765(-) A-I      intronic
chr17:18192601(-) A-I      intronic
chr17:18209736(-) A-I      intronic
chr17:18209469(-) A-I      intronic
chr17:18179126(-) A-I      intronic
chr17:18190208(-) A-I      intronic
chr17:18191050(-) A-I      intronic
chr17:18202495(-) A-I      intronic
chr17:18212936(-) A-I      intronic
chr17:18180318(-) A-I      intronic
chr17:18190235(-) A-I      intronic
chr17:18209952(-) A-I      intronic
chr17:18190921(-) A-I      intronic
chr17:18209368(-) A-I      intronic
chr17:18209905(-) A-I      intronic
chr17:18199728(-) A-I      intronic
chr17:18209324(-) A-I      intronic
chr17:18208909(-) A-I      intronic
chr17:18179134(-) A-I      intronic
chr17:18186652(-) A-I      intronic
chr17:18191000(-) A-I      intronic
chr17:18183302(-) A-I      intronic
chr17:18180376(-) A-I      intronic
chr17:18209809(-) A-I      intronic
chr17:18192561(-) A-I      intronic
chr17:18191131(-) A-I      intronic
chr17:18178374(-) A-I      intronic
chr17:18202543(-) A-I      intronic
chr17:18209468(-) A-I      intronic
chr17:18192926(-) A-I      intronic
chr17:18190476(-) A-I      intronic
chr17:18178461(-) A-I      intronic
chr17:18191646(-) A-I      intronic
chr17:18210803(-) A-I      intronic
chr17:18209114(-) A-I      intronic
chr17:18182089(-) A-I      intronic
chr17:18209052(-) A-I      intronic
chr17:18182906(-) A-I      intronic
chr17:18202522(-) A-I      intronic
chr17:18178852(-) A-I      intronic
chr17:18180256(-) A-I      intronic
chr17:18212911(-) A-I      intronic
chr17:18191190(-) A-I      intronic
chr17:18209783(-) A-I      intronic
chr17:18191104(-) A-I      intronic
chr17:18206820(-) A-I      intronic
chr17:18178460(-) A-I      intronic
chr17:18207551(-) A-I      intronic
chr17:18199178(-) A-I      intronic
chr17:18198605(-) A-I      intronic
chr17:18191236(-) A-I      intronic
chr17:18178491(-) A-I      intronic
chr17:18178398(-) A-I      intronic
chr17:18216174(-) A-I      intronic
chr17:18199714(-) A-I      intronic
chr17:18192783(-) A-I      intronic
chr17:18210790(-) A-I      intronic
chr17:18180422(-) A-I      intronic
chr17:18179174(-) A-I      intronic
chr17:18182216(-) A-I      intronic
chr17:18213632(-) A-I      intronic
chr17:18190740(-) A-I      intronic
chr17:18199782(-) A-I      intronic
chr17:18209802(-) A-I      intronic
chr17:18191627(-) A-I      intronic
chr17:18192465(-) A-I      intronic
chr17:18209870(-) A-I      intronic
chr17:18190758(-) A-I      intronic
chr17:18190467(-) A-I      intronic
chr17:18190629(-) A-I      intronic
chr17:18209971(-) A-I      intronic
chr17:18190908(-) A-I      intronic
chr17:18209973(-) A-I      intronic
chr17:18182248(-) A-I      intronic
chr17:18209392(-) A-I      intronic
chr17:18190631(-) A-I      intronic
chr17:18182037(-) A-I      intronic
chr17:18190262(-) A-I      intronic
chr17:18178770(-) A-I      intronic
chr17:18191075(-) A-I      intronic
chr17:18177422(-) A-I      3'UTR
chr17:18177454(-) A-I      3'UTR
chr17:18177464(-) A-I      3'UTR
chr17:18177523(-) A-I      3'UTR
chr17:18177323(-) A-I      3'UTR
chr17:18177379(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TOP3A
chr17:18177327(-) A-I exon 3'UTR    15342557
chr17:18177348(-) A-I exon 3'UTR    15342557
chr17:18177375(-) A-I exon 3'UTR    15342557   //21960545   //22327324
chr17:18177379(-) A-I exon 3'UTR    15342557   //21960545
chr17:18177415(-) A-I exon 3'UTR    15342557
chr17:18177422(-) A-I exon 3'UTR    15342557
chr17:18177430(-) A-I exon 3'UTR    15342557
chr17:18177454(-) A-I exon 3'UTR    15342557
chr17:18177460(-) A-I exon 3'UTR    15342557
chr17:18177478(-) A-I exon 3'UTR    15342557
chr17:18177532(-) A-I exon 3'UTR    15342557
chr17:18209114(-) A-I intron -    22327324
chr17:18209792(-) A-I intron -    22327324
chr17:18209953(-) A-I intron -    22327324
chr17:18214412(-) A-I intron -    22028664
chr17:18214426(-) A-I intron -    22028664
chr17:18214453(-) A-I intron -    22028664
chr17:18214479(-) A-I intron -    22028664
chr17:18214494(-) A-I intron -    22028664
chr17:18214509(-) A-I intron -    22028664
chr17:18214519(-) A-I intron -    22028664
chr17:18214542(-) A-I intron -    22028664
chr17:18214586(-) A-I intron -    22028664
chr17:18214587(-) A-I intron -    22028664
chr17:18214593(-) A-I intron -    22028664
chr17:18214595(-) A-I intron -    22028664
chr17:18214605(-) A-I intron -    22028664
chr17:18214609(-) A-I intron -    22028664
chr17:18214696(-) A-I intron -    22028664
chr17:18214705(-) A-I intron -    22028664
chr17:18214768(-) A-I intron -    22028664
chr17:18214772(-) A-I intron -    22028664
chr17:18214796(-) A-I intron -    22028664
chr17:18214803(-) A-I intron -    22028664
chr17:18214811(-) A-I intron -    22028664
chr17:18214826(-) A-I intron -    22028664
chr17:18214827(-) A-I intron -    22028664
chr17:18214840(-) A-I intron -    22028664
chr17:18214850(-) A-I intron -    22028664
chr17:18214857(-) A-I intron -    22028664
chr17:18177389(-) A-I exon 3'UTR    21960545
chr17:18177430(-) A-G exon 3'UTR    21725310   //22484847
chr17:18177323(-) A-G exon 3'UTR    22484847
chr17:18177375(-) A-G exon 3'UTR    22484847
chr17:18177454(-) A-G exon 3'UTR    22484847
chr17:18177540(-) A-G exon 3'UTR    22484847
chr17:18178812(-) A-G intron -    22484847
chr17:18182049(-) A-G intron -    22484847
chr17:18190208(-) A-G intron -    22484847
chr17:18190262(-) A-G intron -    22484847
chr17:18190268(-) A-G intron -    22484847
chr17:18190455(-) A-G intron -    22484847
chr17:18190467(-) A-G intron -    22484847
chr17:18190468(-) A-G intron -    22484847
chr17:18190476(-) A-G intron -    22484847
chr17:18190477(-) A-G intron -    22484847
chr17:18190921(-) A-G intron -    22484847
chr17:18191145(-) A-G intron -    22484847
chr17:18191148(-) A-G intron -    22484847
chr17:18191196(-) A-G intron -    22484847
chr17:18191236(-) A-G intron -    22484847
chr17:18198968(-) A-G intron -    22484847
chr17:18198969(-) A-G intron -    22484847
chr17:18208896(-) A-G intron -    22484847
chr17:18209114(-) A-G intron -    22484847
chr17:18209734(-) A-G intron -    22484847
chr17:18209736(-) A-G intron -    22484847
chr17:18209792(-) A-G intron -    22484847
chr17:18209802(-) A-G intron -    22484847
chr17:18209952(-) A-G intron -    22484847
chr17:18209953(-) A-G intron -    22484847
chr17:18209971(-) A-G intron -    22484847
chr17:18209973(-) A-G intron -    22484847
chr17:18212844(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TOP3A
chr17:18174914-18174915(-) m6A 3'UTR       25456834//24981863
chr17:18174938-18174939(-) m6A 3'UTR       25456834//24981863
chr17:18174963-18174964(-) m6A 3'UTR       25456834//24981863
chr17:18176161-18176162(-) m6A 3'UTR//intron       25456834//24981863
chr17:18176588-18176589(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr17:18176615-18176616(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr17:18177289-18177290(-) m6A 3'UTR//exon//intron       24981863
chr17:18177346-18177347(-) m6A 3'UTR//exon//intron       24981863
chr17:18177386-18177387(-) m6A 3'UTR//exon//intron       24981863
chr17:18177443-18177444(-) m6A 3'UTR//exon//intron       24209618//25456834//24981863
chr17:18177466-18177467(-) m6A 3'UTR//exon//intron       24209618//25456834//24981863
chr17:18177554-18177555(-) m6A 3'UTR//exon//intron       24981863
chr17:18177583-18177584(-) m6A 3'UTR//exon//intron       24981863
chr17:18177852-18177853(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18177924-18177925(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178007-18178008(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:18178016-18178017(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:18178043-18178044(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:18178080-18178081(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:18178122-18178123(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178148-18178149(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178181-18178182(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178203-18178204(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178252-18178253(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178263-18178264(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178270-18178271(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18178291-18178292(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18180999-18181000(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18181079-18181080(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr17:18181096-18181097(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr17:18181220-18181221(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr17:18181266-18181267(-) m6A 3'UTR//CDS//exon       24284625//24981863//27371828//27773536//22575960//22608085
chr17:18181423-18181424(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18181454-18181455(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18181488-18181489(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18181497-18181498(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:18181569-18181570(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr17:18202879-18202880(-) m6A 3'UTR//CDS//exon       24981863
chr17:18212246-18212247(-) m6A CDS//exon//intron       27773536
chr17:18218039-18218040(-) m6A CDS//exon       24284625//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate jcv-miR-J1-5p
Nucleus PML tissue     32324824
TOP3A
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: jcv-miR-J1-5p
Interactor2: TOP3A

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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