Basic Information:

  VIRBase ID:  

VHID00666609

  Virus:  

JC polyomavirus (JCPyV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      jcv-miR-J1-5p:  MIMAT0009147          BDKRB2:  NM_001379692     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	jcv-miR-J1-5p	BDKRB2
miRBase Accession/Entrez ID	MIMAT0009147	624
Organism	JC polyomavirus (JCPyV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	B2R//BK-2//BK2//BKR2//BRB2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BDKRB2	chr14:96686410(+) A-I      intronic chr14:96686444(+) A-I      intronic chr14:96686472(+) A-I      intronic chr14:96686407(+) A-I      intronic chr14:96699463(+) A-I      intronic chr14:96701429(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BDKRB2	chr14:96671232-96671233(+) m6A 5'UTR       24981863 chr14:96689455-96689456(+) m6A intron       24981863 chr14:96689472-96689473(+) m6A intron       24981863 chr14:96689523-96689524(+) m6A intron       24981863 chr14:96689546-96689547(+) m6A intron       24981863 chr14:96689632-96689633(+) m6A intron       24981863 chr14:96703490-96703491(+) m6A 5'UTR//CDS       24284625//25456834//24981863 chr14:96704353-96704354(+) m6A 5'UTR//intron       24981863 chr14:96704362-96704363(+) m6A 5'UTR//intron       24981863 chr14:96704392-96704393(+) m6A 5'UTR//intron       24981863 chr14:96704448-96704449(+) m6A 5'UTR//intron       24981863 chr14:96704979-96704980(+) m6A 5'UTR//intron       24981863 chr14:96705288-96705289(+) m6A 5'UTR//intron       24981863 chr14:96705371-96705372(+) m6A 5'UTR//intron       24284625//24981863 chr14:96705461-96705462(+) m6A 5'UTR//intron       24981863 chr14:96706111-96706112(+) m6A 5'UTR//intron       24981863 chr14:96706121-96706122(+) m6A 5'UTR//intron       24981863 chr14:96706220-96706221(+) m6A 5'UTR//intron       24981863 chr14:96706233-96706234(+) m6A 5'UTR//intron       24981863 chr14:96706239-96706240(+) m6A 5'UTR//intron       24981863 chr14:96706275-96706276(+) m6A 5'UTR//intron       24981863 chr14:96706785-96706786(+) m6A CDS       24981863 chr14:96707083-96707084(+) m6A CDS       24981863 chr14:96707148-96707149(+) m6A CDS       24981863 chr14:96707741-96707742(+) m6A CDS       24284625//25456834//24981863//22575960 chr14:96707758-96707759(+) m6A CDS       24284625//25456834//24981863//22575960 chr14:96707778-96707779(+) m6A CDS       24284625//25456834//24981863//26404942//22575960 chr14:96707810-96707811(+) m6A CDS       24284625//25456834//24981863//26404942//22575960 chr14:96707818-96707819(+) m6A CDS       24284625//25456834//24981863//26404942//22575960 chr14:96707834-96707835(+) m6A CDS       24284625//25456834//24981863//26404942//22575960 chr14:96707886-96707887(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960 chr14:96707925-96707926(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960 chr14:96707970-96707971(+) m6A 3'UTR       24284625//24981863//26404942//22575960 chr14:96707979-96707980(+) m6A 3'UTR       24284625//24981863//26404942//22575960 chr14:96708034-96708035(+) m6A 3'UTR       24284625//24981863//26404942//22575960 chr14:96708052-96708053(+) m6A 3'UTR       24284625//24981863//26404942//22575960 chr14:96708199-96708200(+) m6A 3'UTR       24284625//24981863//22575960 chr14:96708220-96708221(+) m6A 3'UTR       24284625//24981863 chr14:96708299-96708300(+) m6A 3'UTR       24284625//24981863 chr14:96708309-96708310(+) m6A 3'UTR       24284625//24981863//26404942 chr14:96708367-96708368(+) m6A 3'UTR       24284625//24981863//26404942 chr14:96708398-96708399(+) m6A 3'UTR       24284625//24981863//26404942 chr14:96708520-96708521(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960 chr14:96708528-96708529(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960 chr14:96708611-96708612(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960 chr14:96708627-96708628(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960 chr14:96708823-96708824(+) m6A 3'UTR       24981863 chr14:96709076-96709077(+) m6A 3'UTR       24981863 chr14:96709131-96709132(+) m6A 3'UTR       24981863 chr14:96709328-96709329(+) m6A 3'UTR       24981863 chr14:96709337-96709338(+) m6A 3'UTR       24981863 chr14:96709343-96709344(+) m6A 3'UTR       24981863 chr14:96709358-96709359(+) m6A 3'UTR       24981863 chr14:96709373-96709374(+) m6A 3'UTR       24981863 chr14:96709389-96709390(+) m6A 3'UTR       24981863 chr14:96709405-96709406(+) m6A 3'UTR       24981863 chr14:96709421-96709422(+) m6A 3'UTR       24981863 chr14:96709442-96709443(+) m6A 3'UTR       24981863 chr14:96709448-96709449(+) m6A 3'UTR       24981863 chr14:96709478-96709479(+) m6A 3'UTR       24981863 chr14:96709493-96709494(+) m6A 3'UTR       24981863 chr14:96709523-96709524(+) m6A 3'UTR       24981863 chr14:96709553-96709554(+) m6A 3'UTR       24981863 chr14:96709568-96709569(+) m6A 3'UTR       24981863 chr14:96709583-96709584(+) m6A 3'UTR       24981863 chr14:96709599-96709600(+) m6A 3'UTR       24981863 chr14:96709629-96709630(+) m6A 3'UTR       24981863 chr14:96709644-96709645(+) m6A 3'UTR       24981863 chr14:96709659-96709660(+) m6A 3'UTR       24981863 chr14:96709675-96709676(+) m6A 3'UTR       24981863 chr14:96709705-96709706(+) m6A 3'UTR       24981863 chr14:96709720-96709721(+) m6A 3'UTR       24981863 chr14:96709735-96709736(+) m6A 3'UTR       24981863 chr14:96709751-96709752(+) m6A 3'UTR       24284625//24981863 chr14:96709766-96709767(+) m6A 3'UTR       24284625//24981863 chr14:96709781-96709782(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96709797-96709798(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96709812-96709813(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96709827-96709828(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96709843-96709844(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96709858-96709859(+) m6A 3'UTR       24284625//24981863 chr14:96709873-96709874(+) m6A 3'UTR       24284625//24981863 chr14:96709888-96709889(+) m6A 3'UTR       24284625//24981863 chr14:96709903-96709904(+) m6A 3'UTR       24284625//24981863 chr14:96709918-96709919(+) m6A 3'UTR       24981863 chr14:96709933-96709934(+) m6A 3'UTR       24981863 chr14:96710104-96710105(+) m6A 3'UTR       24981863 chr14:96710126-96710127(+) m6A 3'UTR       24981863 chr14:96710158-96710159(+) m6A 3'UTR       24981863 chr14:96710252-96710253(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96710373-96710374(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96710391-96710392(+) m6A 3'UTR       24284625//25456834//24981863 chr14:96710415-96710416(+) m6A 3'UTR       24284625//24981863 chr14:96710454-96710455(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	jcv-miR-J1-5p	Nucleus PML tissue     32324824
	BDKRB2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: jcv-miR-J1-5p
Interactor2: BDKRB2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg