Basic Information:

  VIRBase ID:  

VHID00661928

  Virus:  

Human polyomavirus 1 (BKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      bkv-miR-B1-5p:  MIMAT0009149          RNF150:  NM_020724     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	bkv-miR-B1-5p	RNF150
miRBase Accession/Entrez ID	MIMAT0009149	57484
Organism	Human polyomavirus 1 (BKV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RNF150	chr4:142027896(-) A-I      intronic chr4:142017419(-) A-I      intronic chr4:141802384(-) A-I      intronic chr4:141802811(-) A-I      intronic chr4:141810295(-) A-I      intronic chr4:142017427(-) A-I      intronic chr4:141803013(-) A-I      intronic chr4:141803002(-) A-I      intronic chr4:141802997(-) A-I      intronic chr4:141802431(-) A-I      intronic chr4:141802414(-) A-I      intronic chr4:141802389(-) A-I      intronic chr4:141802385(-) A-I      intronic chr4:141896369(-) A-I      intronic chr4:141896334(-) A-I      intronic chr4:141896310(-) A-I      intronic chr4:141851293(-) A-I      intronic chr4:141933837(-) A-I      intronic chr4:141896377(-) A-I      intronic chr4:141802799(-) A-I      intronic chr4:141802785(-) A-I      intronic chr4:141800951(-) A-I      intronic chr4:141800759(-) A-I      intronic chr4:141800742(-) A-I      intronic chr4:142017418(-) A-I      intronic chr4:141802364(-) A-I      intronic chr4:142017411(-) A-I      intronic chr4:141986291(-) A-I      intronic chr4:141977507(-) A-I      intronic chr4:141802379(-) A-I      intronic chr4:142027909(-) A-I      intronic chr4:141867842(-) A-I      intronic chr4:141806422(-) A-I      intronic chr4:141851132(-) A-I      intronic chr4:141849839(-) A-I      intronic chr4:141867825(-) A-I      intronic chr4:142023064(-) A-I      intronic chr4:141806384(-) A-I      intronic chr4:141802846(-) A-I      intronic chr4:141806832(-) A-I      intronic chr4:141803001(-) A-I      intronic chr4:141813971(-) A-I      intronic chr4:142079362(-) A-I      intronic chr4:142077573(-) A-I      intronic chr4:141803004(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNF150	chr4:141782343-141782344(-) m6A 3'UTR       22608085 chr4:141782410-141782411(-) m6A 3'UTR       22575960//22608085 chr4:141782530-141782531(-) m6A 3'UTR       22575960//22608085 chr4:141782550-141782551(-) m6A 3'UTR       22575960//22608085 chr4:141785726-141785727(-) m6A 3'UTR       24284625 chr4:141785755-141785756(-) m6A 3'UTR       24284625//24981863//22608085 chr4:141785763-141785764(-) m6A 3'UTR       24284625//24981863//22608085 chr4:141785859-141785860(-) m6A 3'UTR       24284625//24981863//22608085 chr4:141785866-141785867(-) m6A 3'UTR       24284625//24981863//22608085 chr4:141785897-141785898(-) m6A 3'UTR       24284625//22608085 chr4:141785905-141785906(-) m6A 3'UTR       24284625//22608085 chr4:141785935-141785936(-) m6A 3'UTR       24284625 chr4:141785957-141785958(-) m6A 3'UTR       24284625 chr4:141785967-141785968(-) m6A 3'UTR       24284625 chr4:141789130-141789131(-) m6A 3'UTR       24981863//22608085 chr4:141789136-141789137(-) m6A 3'UTR       24981863//22608085 chr4:141789160-141789161(-) m6A 3'UTR       24284625//24209618//24981863//22608085 chr4:141789342-141789343(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr4:141789348-141789349(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr4:141789381-141789382(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr4:141789436-141789437(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr4:141789453-141789454(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr4:141789468-141789469(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr4:141832258-141832259(-) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085 chr4:141832338-141832339(-) m6A CDS       24284625 chr4:141868886-141868887(-) m6A CDS//exon       24981863 chr4:141870474-141870475(-) m6A CDS//exon       24981863 chr4:141870487-141870488(-) m6A CDS//exon       24981863 chr4:141888780-141888781(-) m6A CDS//exon//intron       24981863 chr4:142053615-142053616(-) m6A CDS//intron       24284625//27773536//22575960 chr4:142053801-142053802(-) m6A CDS//intron       24209618//27371828//27773536//22575960 chr4:142053828-142053829(-) m6A CDS//intron       24209618//22575960 chr4:142053873-142053874(-) m6A CDS//intron       24284625//24209618//24981863//22575960 chr4:142054244-142054245(-) m6A 5'UTR//intron       24284625//25456834//27371828//27773536//22575960//22608085 chr4:142054377-142054378(-) m6A 5'UTR//intron       27371828//27773536//22575960//22608085 chr4:142054413-142054414(-) m6A 5'UTR//intron       24209618//27371828//27773536//22575960 chr4:142054480-142054481(-) m6A 5'UTR//intron       24209618//27371828//27773536//22575960 chr4:142054602-142054603(-) m6A 5'UTR//intron       24981863 chr4:142133949-142133950(-) m6A 5'UTR       24981863 chr4:142133970-142133971(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RNF150	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: bkv-miR-B1-5p
Interactor2: RNF150

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg