Detail Information

Basic Information:


  VIRBase ID:  

VHID00661640

  Virus:  

Human polyomavirus 1 (BKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      bkv-miR-B1-5p:           RPRD1A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol bkv-miR-B1-5p RPRD1A
miRBase
Accession/Entrez ID		 MIMAT0009149 55197
Organism Human polyomavirus 1 (BKV) Homo sapiens
Category miRNA mRNA
Alias - HsT3101//P15RS

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RPRD1A
chr18:33610336(-) A-I      intronic
chr18:33610334(-) A-I      intronic
chr18:33610329(-) A-I      intronic
chr18:33610318(-) A-I      intronic
chr18:33601901(-) A-I      intronic
chr18:33601895(-) A-I      intronic
chr18:33596383(-) A-I      intronic
chr18:33596379(-) A-I      intronic
chr18:33596363(-) A-I      intronic
chr18:33578213(-) A-I      intronic
chr18:33596355(-) A-I      intronic
chr18:33596353(-) A-I      intronic
chr18:33578267(-) A-I      intronic
chr18:33595340(-) A-I      intronic
chr18:33595353(-) A-I      intronic
chr18:33634334(-) A-I      intronic
chr18:33610338(-) A-I      intronic
chr18:33604673(-) A-I      intronic
chr18:33583725(-) A-I      intronic
chr18:33584385(-) A-I      intronic
chr18:33584413(-) A-I      intronic
chr18:33584414(-) A-I      intronic
chr18:33584421(-) A-I      intronic
chr18:33584422(-) A-I      intronic
chr18:33596318(-) A-I      intronic
chr18:33578199(-) A-I      intronic
chr18:33602879(-) A-I      intronic
chr18:33610324(-) A-I      intronic
chr18:33640284(-) A-I      intronic
chr18:33639319(-) A-I      intronic
chr18:33639277(-) A-I      intronic
chr18:33637523(-) A-I      intronic
chr18:33637522(-) A-I      intronic
chr18:33637516(-) A-I      intronic
chr18:33637480(-) A-I      intronic
chr18:33637367(-) A-I      intronic
chr18:33636961(-) A-I      intronic
chr18:33636452(-) A-I      intronic
chr18:33636389(-) A-I      intronic
chr18:33636323(-) A-I      intronic
chr18:33599128(-) A-I      intronic
chr18:33598348(-) A-I      intronic
chr18:33597262(-) A-I      intronic
chr18:33597218(-) A-I      intronic
chr18:33609829(-) A-I      intronic
chr18:33596405(-) A-I      intronic
chr18:33596389(-) A-I      intronic
chr18:33596380(-) A-I      intronic
chr18:33596302(-) A-I      intronic
chr18:33596282(-) A-I      intronic
chr18:33596278(-) A-I      intronic
chr18:33595355(-) A-I      intronic
chr18:33595352(-) A-I      intronic
chr18:33595344(-) A-I      intronic
chr18:33595343(-) A-I      intronic
chr18:33595308(-) A-I      intronic
chr18:33594630(-) A-I      intronic
chr18:33594522(-) A-I      intronic
chr18:33586453(-) A-I      intronic
chr18:33586383(-) A-I      intronic
chr18:33586358(-) A-I      intronic
chr18:33586270(-) A-I      intronic
chr18:33586257(-) A-I      intronic
chr18:33585217(-) A-I      intronic
chr18:33585207(-) A-I      intronic
chr18:33585195(-) A-I      intronic
chr18:33585106(-) A-I      intronic
chr18:33585043(-) A-I      intronic
chr18:33584860(-) A-I      intronic
chr18:33584744(-) A-I      intronic
chr18:33584398(-) A-I      intronic
chr18:33584397(-) A-I      intronic
chr18:33578273(-) A-I      intronic
chr18:33578153(-) A-I      intronic
chr18:33576937(-) A-I      intronic
chr18:33576935(-) A-I      intronic
chr18:33576927(-) A-I      intronic
chr18:33576922(-) A-I      intronic
chr18:33599139(-) A-I      intronic
chr18:33599106(-) A-I      intronic
chr18:33610282(-) A-I      intronic
chr18:33610284(-) A-I      intronic
chr18:33632729(-) A-I      intronic
chr18:33632740(-) A-I      intronic
chr18:33632742(-) A-I      intronic
chr18:33632745(-) A-I      intronic
chr18:33636285(-) A-I      intronic
chr18:33578221(-) A-I      intronic
chr18:33575294(-) A-I      intronic
chr18:33609826(-) A-I      intronic
chr18:33604225(-) A-I      intronic
chr18:33604212(-) A-I      intronic
chr18:33575311(-) A-I      intronic
chr18:33575329(-) A-I      intronic
chr18:33575425(-) A-I      intronic
chr18:33610307(-) A-I      intronic
chr18:33594508(-) A-I      intronic
chr18:33599275(-) A-I      intronic
chr18:33599273(-) A-I      intronic
chr18:33599265(-) A-I      intronic
chr18:33599248(-) A-I      intronic
chr18:33599242(-) A-I      intronic
chr18:33575520(-) A-I      intronic
chr18:33576905(-) A-I      intronic
chr18:33602817(-) A-I      intronic
chr18:33610359(-) A-I      intronic
chr18:33626612(-) A-I      intronic
chr18:33601914(-) A-I      intronic
chr18:33632722(-) A-I      intronic
chr18:33599182(-) A-I      intronic
chr18:33609987(-) A-I      intronic
chr18:33629150(-) A-I      intronic
chr18:33640213(-) A-I      intronic
chr18:33597043(-) A-I      intronic
chr18:33602809(-) A-I      intronic
chr18:33584278(-) A-I      intronic
chr18:33602890(-) A-I      intronic
chr18:33632726(-) A-I      intronic
chr18:33601770(-) A-I      intronic
chr18:33596334(-) A-I      intronic
chr18:33599728(-) A-I      intronic
chr18:33597161(-) A-I      intronic
chr18:33637071(-) A-I      intronic
chr18:33596220(-) A-I      intronic
chr18:33610256(-) A-I      intronic
chr18:33597258(-) A-I      intronic
chr18:33601877(-) A-I      intronic
chr18:33599855(-) A-I      intronic
chr18:33643304(-) A-I      intronic
chr18:33584766(-) A-I      intronic
chr18:33602842(-) A-I      intronic
chr18:33599365(-) A-I      intronic
chr18:33594702(-) A-I      intronic
chr18:33599981(-) A-I      intronic
chr18:33596368(-) A-I      intronic
chr18:33596441(-) A-I      intronic
chr18:33600733(-) A-I      intronic
chr18:33602757(-) A-I      intronic
chr18:33604238(-) A-I      intronic
chr18:33639247(-) A-I      intronic
chr18:33586348(-) A-I      intronic
chr18:33602901(-) A-I      intronic
chr18:33602669(-) A-I      intronic
chr18:33597151(-) A-I      intronic
chr18:33576671(-) A-I      intronic
chr18:33599989(-) A-I      intronic
chr18:33575338(-) A-I      intronic
chr18:33596324(-) A-I      intronic
chr18:33583840(-) A-I      intronic
chr18:33628126(-) A-I      intronic
chr18:33588296(-) A-I      intronic
chr18:33645458(-) A-I      intronic
chr18:33639238(-) A-I      intronic
chr18:33638117(-) A-I      intronic
chr18:33575366(-) A-I      intronic
chr18:33584474(-) A-I      intronic
chr18:33601842(-) A-I      intronic
chr18:33576879(-) A-I      intronic
chr18:33602825(-) A-I      intronic
chr18:33584346(-) A-I      intronic
chr18:33599260(-) A-I      intronic
chr18:33598509(-) A-I      intronic
chr18:33599342(-) A-I      intronic
chr18:33595238(-) A-I      intronic
chr18:33602708(-) A-I      intronic
chr18:33601878(-) A-I      intronic
chr18:33599881(-) A-I      intronic
chr18:33596350(-) A-I      intronic
chr18:33584417(-) A-I      intronic
chr18:33626736(-) A-I      intronic
chr18:33576848(-) A-I      intronic
chr18:33597220(-) A-I      intronic
chr18:33626722(-) A-I      intronic
chr18:33576859(-) A-I      intronic
chr18:33597242(-) A-I      intronic
chr18:33599811(-) A-I      intronic
chr18:33599951(-) A-I      intronic
chr18:33594704(-) A-I      intronic
chr18:33601791(-) A-I      intronic
chr18:33586279(-) A-I      intronic
chr18:33597144(-) A-I      intronic
chr18:33595314(-) A-I      intronic
chr18:33600763(-) A-I      intronic
chr18:33643390(-) A-I      intronic
chr18:33599751(-) A-I      intronic
chr18:33597181(-) A-I      intronic
chr18:33588463(-) A-I      intronic
chr18:33599209(-) A-I      intronic
chr18:33576894(-) A-I      intronic
chr18:33596340(-) A-I      intronic
chr18:33613001(-) A-I      intronic
chr18:33598508(-) A-I      intronic
chr18:33597211(-) A-I      intronic
chr18:33583900(-) A-I      intronic
chr18:33584310(-) A-I      intronic
chr18:33599820(-) A-I      intronic
chr18:33588417(-) A-I      intronic
chr18:33584315(-) A-I      intronic
chr18:33599343(-) A-I      intronic
chr18:33595354(-) A-I      intronic
chr18:33599280(-) A-I      intronic
chr18:33602681(-) A-I      intronic
chr18:33597107(-) A-I      intronic
chr18:33575432(-) A-I      intronic
chr18:33597257(-) A-I      intronic
chr18:33602754(-) A-I      intronic
chr18:33578239(-) A-I      intronic
chr18:33610036(-) A-I      intronic
chr18:33584783(-) A-I      intronic
chr18:33604391(-) A-I      intronic
chr18:33599239(-) A-I      intronic
chr18:33588443(-) A-I      intronic
chr18:33599251(-) A-I      intronic
chr18:33602845(-) A-I      intronic
chr18:33600739(-) A-I      intronic
chr18:33584387(-) A-I      intronic
chr18:33610185(-) A-I      intronic
chr18:33600725(-) A-I      intronic
chr18:33588035(-) A-I      intronic
chr18:33575522(-) A-I      intronic
chr18:33637544(-) A-I      intronic
chr18:33598369(-) A-I      intronic
chr18:33599800(-) A-I      intronic
chr18:33595380(-) A-I      intronic
chr18:33595446(-) A-I      intronic
chr18:33595394(-) A-I      intronic
chr18:33637386(-) A-I      intronic
chr18:33588290(-) A-I      intronic
chr18:33634344(-) A-I      intronic
chr18:33598365(-) A-I      intronic
chr18:33588323(-) A-I      intronic
chr18:33588326(-) A-I      intronic
chr18:33637571(-) A-I      intronic
chr18:33637573(-) A-I      intronic
chr18:33599167(-) A-I      intronic
chr18:33578280(-) A-I      intronic
chr18:33575393(-) A-I      intronic
chr18:33584435(-) A-I      intronic
chr18:33594512(-) A-I      intronic
chr18:33637463(-) A-I      intronic
chr18:33588020(-) A-I      intronic
chr18:33610191(-) A-I      intronic
chr18:33637561(-) A-I      intronic
chr18:33576721(-) A-I      intronic
chr18:33597124(-) A-I      intronic
chr18:33600681(-) A-I      intronic
chr18:33595358(-) A-I      intronic
chr18:33602838(-) A-I      intronic
chr18:33584709(-) A-I      intronic
chr18:33576709(-) A-I      intronic
chr18:33595369(-) A-I      intronic
chr18:33602758(-) A-I      intronic
chr18:33626677(-) A-I      intronic
chr18:33584852(-) A-I      intronic
chr18:33576737(-) A-I      intronic
chr18:33578065(-) A-I      intronic
chr18:33599921(-) A-I      intronic
chr18:33597207(-) A-I      intronic
chr18:33604356(-) A-I      intronic
chr18:33576755(-) A-I      intronic
chr18:33598401(-) A-I      intronic
chr18:33637353(-) A-I      intronic
chr18:33588439(-) A-I      intronic
chr18:33600741(-) A-I      intronic
chr18:33604242(-) A-I      intronic
chr18:33601727(-) A-I      intronic
chr18:33601869(-) A-I      intronic
chr18:33640274(-) A-I      intronic
chr18:33584473(-) A-I      intronic
chr18:33632736(-) A-I      intronic
chr18:33604374(-) A-I      intronic
chr18:33598420(-) A-I      intronic
chr18:33584382(-) A-I      intronic
chr18:33637077(-) A-I      intronic
chr18:33578245(-) A-I      intronic
chr18:33604332(-) A-I      intronic
chr18:33578238(-) A-I      intronic
chr18:33604248(-) A-I      intronic
chr18:33598375(-) A-I      intronic
chr18:33597012(-) A-I      intronic
chr18:33597217(-) A-I      intronic
chr18:33595379(-) A-I      intronic
chr18:33588427(-) A-I      intronic
chr18:33584386(-) A-I      intronic
chr18:33629003(-) A-I      intronic
chr18:33576684(-) A-I      intronic
chr18:33599831(-) A-I      intronic
chr18:33610041(-) A-I      intronic
chr18:33636523(-) A-I      intronic
chr18:33599238(-) A-I      intronic
chr18:33584391(-) A-I      intronic
chr18:33597024(-) A-I      intronic
chr18:33599891(-) A-I      intronic
chr18:33601705(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RPRD1A
chr18:33575366(-) A-G intron -    22484847
chr18:33576879(-) A-G intron -    22484847
chr18:33583824(-) A-G intron -    22484847
chr18:33583900(-) A-G intron -    22484847
chr18:33584083(-) A-G intron -    22484847
chr18:33584346(-) A-G intron -    22484847
chr18:33584386(-) A-G intron -    22484847
chr18:33584741(-) A-G intron -    22484847
chr18:33584766(-) A-G intron -    22484847
chr18:33596441(-) A-G intron -    22484847
chr18:33599342(-) A-G intron -    22484847
chr18:33599343(-) A-G intron -    22484847
chr18:33602901(-) A-G intron -    22484847
chr18:33604391(-) A-G intron -    22484847
chr18:33604392(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RPRD1A
chr18:33564448-33564449(-) m6A 3'UTR       27773535
chr18:33572998-33572999(-) m6A 3'UTR//intron       24981863//22608085
chr18:33573013-33573014(-) m6A 3'UTR//intron       24981863//22608085
chr18:33573067-33573068(-) m6A 3'UTR       24284625//24981863//22608085
chr18:33573085-33573086(-) m6A 3'UTR       24284625//24981863//22608085
chr18:33573109-33573110(-) m6A 3'UTR       24284625//24981863//22608085
chr18:33573132-33573133(-) m6A CDS       24284625//24981863//22608085
chr18:33573189-33573190(-) m6A CDS       24284625//24981863//22575960//22608085
chr18:33573218-33573219(-) m6A CDS       24284625
chr18:33610779-33610780(-) m6A CDS       24981863
chr18:33610807-33610808(-) m6A CDS       24981863
chr18:33610833-33610834(-) m6A CDS       24981863
chr18:33610841-33610842(-) m6A CDS       24981863
chr18:33610963-33610964(-) m6A CDS       24981863
chr18:33610972-33610973(-) m6A CDS       24981863
chr18:33611055-33611056(-) m6A CDS       24981863
chr18:33613786-33613787(-) Y 3'UTR//CDS       26075521
chr18:33647262-33647263(-) m6A 5'UTR//CDS       27773536
chr18:33647294-33647295(-) m6A 5'UTR//CDS       27371828//27773536
chr18:33647333-33647334(-) m1A 5'UTR//CDS       26863196//26863410
chr18:33647421-33647422(-) m6A 5'UTR       24284625//24209618//24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RPRD1A
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: bkv-miR-B1-5p
Interactor2: RPRD1A

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA
Support Database RepTar//VmiReg

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