Basic Information:

  VIRBase ID:  

VHID00660769

  Virus:  

Human polyomavirus 1 (BKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      bkv-miR-B1-5p:  MIMAT0009149          ZNF277:  NM_021994     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	bkv-miR-B1-5p	ZNF277
miRBase Accession/Entrez ID	MIMAT0009149	11179
Organism	Human polyomavirus 1 (BKV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NRIF4//ZNF277P

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF277	chr7:111948369(+) A-I      intronic chr7:111943103(+) A-I      intronic chr7:111943084(+) A-I      intronic chr7:111923428(+) A-I      intronic chr7:111923419(+) A-I      intronic chr7:111923418(+) A-I      intronic chr7:111923413(+) A-I      intronic chr7:111886316(+) A-I      intronic chr7:111848853(+) A-I      intronic chr7:111871190(+) A-I      intronic chr7:111848865(+) A-I      intronic chr7:111856429(+) A-I      intronic chr7:111850692(+) A-I      intronic chr7:111848309(+) A-I      intronic chr7:111848272(+) A-I      intronic chr7:111848271(+) A-I      intronic chr7:111856465(+) A-I      intronic chr7:111848199(+) A-I      intronic chr7:111948388(+) A-I      intronic chr7:111948451(+) A-I      intronic chr7:111948457(+) A-I      intronic chr7:111948497(+) A-I      intronic chr7:111886268(+) A-I      intronic chr7:111856464(+) A-I      intronic chr7:111848265(+) A-I      intronic chr7:111983727(+) A-I      3'UTR chr7:111983732(+) A-I      3'UTR chr7:111983858(+) A-I      3'UTR chr7:111983753(+) A-I      3'UTR chr7:111983771(+) A-I      3'UTR chr7:111983766(+) A-I      3'UTR chr7:111983761(+) A-I      3'UTR chr7:111983726(+) A-I      3'UTR chr7:111983749(+) A-I      3'UTR chr7:111983936(+) A-I      3'UTR chr7:111983961(+) A-I      3'UTR chr7:111983987(+) A-I      3'UTR chr7:111983720(+) A-I      3'UTR chr7:111983779(+) A-I      3'UTR chr7:111983860(+) A-I      3'UTR chr7:111983834(+) A-I      3'UTR chr7:111983854(+) A-I      3'UTR chr7:111983780(+) A-I      3'UTR chr7:111983794(+) A-I      3'UTR chr7:111983795(+) A-I      3'UTR chr7:111983802(+) A-I      3'UTR chr7:111983819(+) A-I      3'UTR chr7:111983822(+) A-I      3'UTR chr7:111983816(+) A-I      3'UTR chr7:111983884(+) A-I      3'UTR chr7:111983893(+) A-I      3'UTR chr7:111983926(+) A-I      3'UTR chr7:111888012(+) A-I      intronic chr7:111848901(+) A-I      intronic chr7:111923474(+) A-I      intronic chr7:111849016(+) A-I      intronic chr7:111945219(+) A-I      intronic chr7:111848942(+) A-I      intronic chr7:111914316(+) A-I      intronic chr7:111945192(+) A-I      intronic chr7:111923498(+) A-I      intronic chr7:111887876(+) A-I      intronic chr7:111912605(+) A-I      intronic chr7:111920820(+) A-I      intronic chr7:111887847(+) A-I      intronic chr7:111887845(+) A-I      intronic chr7:111848920(+) A-I      intronic chr7:111945214(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF277	chr7:111927214(+) A-I intron -    15342557   //15258596 chr7:111927287(+) A-I intron -    15342557   //15258596 chr7:111927303(+) A-I intron -    15342557   //15258596 chr7:111927309(+) A-I intron -    15342557   //15258596 chr7:111927727(+) A-I intron -    15342557   //15258596 chr7:111927816(+) A-I intron -    15342557   //15258596 chr7:111927834(+) A-I intron -    15342557   //15258596 chr7:111848168(+) A-G intron -    22484847 chr7:111848942(+) A-G intron -    22484847 chr7:111912605(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF277	chr7:111935972-111935973(+) Y 3'UTR//CDS//intron       26075521 chr7:111936356-111936357(+) m6A 3'UTR//CDS//intron       - chr7:111936362-111936363(+) m6A 3'UTR//CDS//intron       - chr7:111958250-111958251(+) m6A 3'UTR//CDS//intron       - chr7:111958324-111958325(+) m6A 3'UTR//CDS//intron       - chr7:111967785-111967786(+) m6A 3'UTR//CDS       - chr7:111967801-111967802(+) m6A 3'UTR//CDS       - chr7:111967827-111967828(+) m6A 3'UTR//CDS       - chr7:111967839-111967840(+) m6A 3'UTR//CDS       - chr7:111982693-111982694(+) m6A 3'UTR//CDS       24981863//27773535//22608085 chr7:111982735-111982736(+) m6A 3'UTR//CDS       24981863//27773535//22608085 chr7:111982750-111982751(+) m6A 3'UTR//CDS       24981863//27773535//22608085 chr7:111982767-111982768(+) m6A 3'UTR//CDS       24981863//27773535//22608085 chr7:111982796-111982797(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111982807-111982808(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111982847-111982848(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111982861-111982862(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111982876-111982877(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111982909-111982910(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111982968-111982969(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111983004-111983005(+) m6A 3'UTR       24981863//27773535//22608085 chr7:111983066-111983067(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF277	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: bkv-miR-B1-5p
Interactor2: ZNF277

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg