Basic Information:

  VIRBase ID:  

VHID00659652

  Virus:  

Human polyomavirus 1 (BKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      bkv-miR-B1-5p:  MIMAT0009149          PRKDC:  NM_006904     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	bkv-miR-B1-5p	PRKDC
miRBase Accession/Entrez ID	MIMAT0009149	5591
Organism	Human polyomavirus 1 (BKV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DNA-PKC//DNA-PKcs//DNAPK//DNAPKc//DNPK1//HYRC//HYRC1//IMD26//p350//XRCC7

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PRKDC	chr8:48692608(-) A-I      intronic chr8:48698050(-) A-I      intronic chr8:48698065(-) A-I      intronic chr8:48858733(-) A-I      intronic chr8:48858747(-) A-I      intronic chr8:48858783(-) A-I      intronic chr8:48858742(-) A-I      intronic chr8:48858483(-) A-I      intronic chr8:48858479(-) A-I      intronic chr8:48834745(-) A-I      intronic chr8:48834572(-) A-I      intronic chr8:48834537(-) A-I      intronic chr8:48687426(-) A-I      intronic chr8:48687580(-) A-I      intronic chr8:48687583(-) A-I      intronic chr8:48687601(-) A-I      intronic chr8:48687686(-) A-I      intronic chr8:48687722(-) A-I      intronic chr8:48688030(-) A-I      intronic chr8:48688048(-) A-I      intronic chr8:48688651(-) A-I      intronic chr8:48692265(-) A-I      intronic chr8:48692266(-) A-I      intronic chr8:48692329(-) A-I      intronic chr8:48692669(-) A-I      intronic chr8:48692740(-) A-I      intronic chr8:48693350(-) A-I      intronic chr8:48693351(-) A-I      intronic chr8:48693355(-) A-I      intronic chr8:48698151(-) A-I      intronic chr8:48698440(-) A-I      intronic chr8:48834536(-) A-I      intronic chr8:48834509(-) A-I      intronic chr8:48834479(-) A-I      intronic chr8:48834436(-) A-I      intronic chr8:48830691(-) A-I      intronic chr8:48830665(-) A-I      intronic chr8:48698629(-) A-I      intronic chr8:48698653(-) A-I      intronic chr8:48699451(-) A-I      intronic chr8:48699560(-) A-I      intronic chr8:48705932(-) A-I      intronic chr8:48705934(-) A-I      intronic chr8:48707518(-) A-I      intronic chr8:48717434(-) A-I      intronic chr8:48720795(-) A-I      intronic chr8:48720877(-) A-I      intronic chr8:48858462(-) A-I      intronic chr8:48858374(-) A-I      intronic chr8:48858370(-) A-I      intronic chr8:48858311(-) A-I      intronic chr8:48851278(-) A-I      intronic chr8:48851273(-) A-I      intronic chr8:48851266(-) A-I      intronic chr8:48850544(-) A-I      intronic chr8:48830533(-) A-I      intronic chr8:48830497(-) A-I      intronic chr8:48829739(-) A-I      intronic chr8:48828925(-) A-I      intronic chr8:48849738(-) A-I      intronic chr8:48721128(-) A-I      intronic chr8:48763627(-) A-I      intronic chr8:48763643(-) A-I      intronic chr8:48763646(-) A-I      intronic chr8:48764655(-) A-I      intronic chr8:48768887(-) A-I      intronic chr8:48780859(-) A-I      intronic chr8:48780901(-) A-I      intronic chr8:48786633(-) A-I      intronic chr8:48786705(-) A-I      intronic chr8:48786712(-) A-I      intronic chr8:48786713(-) A-I      intronic chr8:48786777(-) A-I      intronic chr8:48786791(-) A-I      intronic chr8:48786799(-) A-I      intronic chr8:48787198(-) A-I      intronic chr8:48787203(-) A-I      intronic chr8:48787208(-) A-I      intronic chr8:48787516(-) A-I      intronic chr8:48792464(-) A-I      intronic chr8:48793349(-) A-I      intronic chr8:48793358(-) A-I      intronic chr8:48793370(-) A-I      intronic chr8:48793371(-) A-I      intronic chr8:48793397(-) A-I      intronic chr8:48793486(-) A-I      intronic chr8:48793526(-) A-I      intronic chr8:48797845(-) A-I      intronic chr8:48797851(-) A-I      intronic chr8:48797877(-) A-I      intronic chr8:48797880(-) A-I      intronic chr8:48798305(-) A-I      intronic chr8:48798313(-) A-I      intronic chr8:48798344(-) A-I      intronic chr8:48804025(-) A-I      intronic chr8:48804038(-) A-I      intronic chr8:48804092(-) A-I      intronic chr8:48804199(-) A-I      intronic chr8:48813637(-) A-I      intronic chr8:48816912(-) A-I      intronic chr8:48816930(-) A-I      intronic chr8:48817234(-) A-I      intronic chr8:48817290(-) A-I      intronic chr8:48817839(-) A-I      intronic chr8:48817861(-) A-I      intronic chr8:48818845(-) A-I      intronic chr8:48818866(-) A-I      intronic chr8:48818976(-) A-I      intronic chr8:48819117(-) A-I      intronic chr8:48819124(-) A-I      intronic chr8:48819712(-) A-I      intronic chr8:48819733(-) A-I      intronic chr8:48819821(-) A-I      intronic chr8:48721415(-) A-I      intronic chr8:48724293(-) A-I      intronic chr8:48724303(-) A-I      intronic chr8:48724394(-) A-I      intronic chr8:48763546(-) A-I      intronic chr8:48724426(-) A-I      intronic chr8:48724462(-) A-I      intronic chr8:48727619(-) A-I      intronic chr8:48727641(-) A-I      intronic chr8:48727644(-) A-I      intronic chr8:48727651(-) A-I      intronic chr8:48728582(-) A-I      intronic chr8:48728674(-) A-I      intronic chr8:48748066(-) A-I      intronic chr8:48819835(-) A-I      intronic chr8:48827285(-) A-I      intronic chr8:48748115(-) A-I      intronic chr8:48763385(-) A-I      intronic chr8:48763482(-) A-I      intronic chr8:48763508(-) A-I      intronic chr8:48872237(-) A-I      intronic chr8:48872117(-) A-I      intronic chr8:48872115(-) A-I      intronic chr8:48861259(-) A-I      intronic chr8:48861254(-) A-I      intronic chr8:48861226(-) A-I      intronic chr8:48860849(-) A-I      intronic chr8:48860847(-) A-I      intronic chr8:48860838(-) A-I      intronic chr8:48860743(-) A-I      intronic chr8:48858769(-) A-I      intronic chr8:48860734(-) A-I      intronic chr8:48860594(-) A-I      intronic chr8:48860440(-) A-I      intronic chr8:48860411(-) A-I      intronic chr8:48860405(-) A-I      intronic chr8:48860368(-) A-I      intronic chr8:48860360(-) A-I      intronic chr8:48860242(-) A-I      intronic chr8:48860171(-) A-I      intronic chr8:48860160(-) A-I      intronic chr8:48860084(-) A-I      intronic chr8:48858798(-) A-I      intronic chr8:48858751(-) A-I      intronic chr8:48834949(-) A-I      intronic chr8:48834969(-) A-I      intronic chr8:48835023(-) A-I      intronic chr8:48835064(-) A-I      intronic chr8:48835676(-) A-I      intronic chr8:48835686(-) A-I      intronic chr8:48836927(-) A-I      intronic chr8:48836954(-) A-I      intronic chr8:48836998(-) A-I      intronic chr8:48837020(-) A-I      intronic chr8:48837058(-) A-I      intronic chr8:48849214(-) A-I      intronic chr8:48849305(-) A-I      intronic chr8:48849341(-) A-I      intronic chr8:48692572(-) A-I      intronic chr8:48692591(-) A-I      intronic chr8:48786805(-) A-I      intronic chr8:48861201(-) A-I      intronic chr8:48819072(-) A-I      intronic chr8:48798341(-) A-I      intronic chr8:48860843(-) A-I      intronic chr8:48693387(-) A-I      intronic chr8:48687741(-) A-I      intronic chr8:48871489(-) A-I      intronic chr8:48850621(-) A-I      intronic chr8:48798331(-) A-I      intronic chr8:48692315(-) A-I      intronic chr8:48861051(-) A-I      intronic chr8:48687740(-) A-I      intronic chr8:48860320(-) A-I      intronic chr8:48834478(-) A-I      intronic chr8:48688564(-) A-I      intronic chr8:48692333(-) A-I      intronic chr8:48861122(-) A-I      intronic chr8:48861184(-) A-I      intronic chr8:48819765(-) A-I      intronic chr8:48849699(-) A-I      intronic chr8:48748096(-) A-I      intronic chr8:48688578(-) A-I      intronic chr8:48687388(-) A-I      intronic chr8:48797946(-) A-I      intronic chr8:48818855(-) A-I      intronic chr8:48698849(-) A-I      intronic chr8:48804604(-) A-I      intronic chr8:48860302(-) A-I      intronic chr8:48705720(-) A-I      intronic chr8:48861157(-) A-I      intronic chr8:48720858(-) A-I      intronic chr8:48860250(-) A-I      intronic chr8:48861215(-) A-I      intronic chr8:48698409(-) A-I      intronic chr8:48861092(-) A-I      intronic chr8:48748443(-) A-I      intronic chr8:48861158(-) A-I      intronic chr8:48861048(-) A-I      intronic chr8:48835729(-) A-I      intronic chr8:48798272(-) A-I      intronic chr8:48860896(-) A-I      intronic chr8:48792628(-) A-I      intronic chr8:48861191(-) A-I      intronic chr8:48693336(-) A-I      intronic chr8:48688035(-) A-I      intronic chr8:48819028(-) A-I      intronic chr8:48698484(-) A-I      intronic chr8:48699579(-) A-I      intronic chr8:48693399(-) A-I      intronic chr8:48860305(-) A-I      intronic chr8:48693413(-) A-I      intronic chr8:48820259(-) A-I      intronic chr8:48698200(-) A-I      intronic chr8:48817309(-) A-I      intronic chr8:48692326(-) A-I      intronic chr8:48698851(-) A-I      intronic chr8:48861067(-) A-I      intronic chr8:48699473(-) A-I      intronic chr8:48693333(-) A-I      intronic chr8:48720757(-) A-I      intronic chr8:48688487(-) A-I      intronic chr8:48834910(-) A-I      intronic chr8:48861194(-) A-I      intronic chr8:48816996(-) A-I      intronic chr8:48862665(-) A-I      intronic chr8:48797824(-) A-I      intronic chr8:48860637(-) A-I      intronic chr8:48698032(-) A-I      intronic chr8:48861196(-) A-I      intronic chr8:48804579(-) A-I      intronic chr8:48861052(-) A-I      intronic chr8:48819677(-) A-I      intronic chr8:48829647(-) A-I      intronic chr8:48861294(-) A-I      intronic chr8:48804218(-) A-I      intronic chr8:48858808(-) A-I      intronic chr8:48763511(-) A-I      intronic chr8:48705574(-) A-I      intronic chr8:48787431(-) A-I      intronic chr8:48861166(-) A-I      intronic chr8:48860559(-) A-I      intronic chr8:48835788(-) A-I      intronic chr8:48858727(-) A-I      intronic chr8:48860800(-) A-I      intronic chr8:48699383(-) A-I      intronic chr8:48692699(-) A-I      intronic chr8:48860596(-) A-I      intronic chr8:48858809(-) A-I      intronic chr8:48687439(-) A-I      intronic chr8:48804567(-) A-I      intronic chr8:48860586(-) A-I      intronic chr8:48692548(-) A-I      intronic chr8:48819176(-) A-I      intronic chr8:48834841(-) A-I      intronic chr8:48693244(-) A-I      intronic chr8:48692568(-) A-I      intronic chr8:48858478(-) A-I      intronic chr8:48818759(-) A-I      intronic chr8:48817026(-) A-I      intronic chr8:48688585(-) A-I      intronic chr8:48836875(-) A-I      intronic chr8:48764631(-) A-I      intronic chr8:48861054(-) A-I      intronic chr8:48860848(-) A-I      intronic chr8:48834614(-) A-I      intronic chr8:48692328(-) A-I      intronic chr8:48716433(-) A-I      intronic chr8:48698283(-) A-I      intronic chr8:48699468(-) A-I      intronic chr8:48705671(-) A-I      intronic chr8:48871434(-) A-I      intronic chr8:48835768(-) A-I      intronic chr8:48858555(-) A-I      intronic chr8:48835761(-) A-I      intronic chr8:48688567(-) A-I      intronic chr8:48699429(-) A-I      intronic chr8:48860874(-) A-I      intronic chr8:48804634(-) A-I      intronic chr8:48728666(-) A-I      intronic chr8:48861200(-) A-I      intronic chr8:48817835(-) A-I      intronic chr8:48787504(-) A-I      intronic chr8:48720800(-) A-I      intronic chr8:48804538(-) A-I      intronic chr8:48692672(-) A-I      intronic chr8:48693253(-) A-I      intronic chr8:48698245(-) A-I      intronic chr8:48693412(-) A-I      intronic chr8:48792642(-) A-I      intronic chr8:48727489(-) A-I      intronic chr8:48688087(-) A-I      intronic chr8:48687679(-) A-I      intronic chr8:48721120(-) A-I      intronic chr8:48764594(-) A-I      intronic chr8:48819780(-) A-I      intronic chr8:48849239(-) A-I      intronic chr8:48858633(-) A-I      intronic chr8:48698074(-) A-I      intronic chr8:48693442(-) A-I      intronic chr8:48784356(-) A-I      intronic chr8:48797804(-) A-I      intronic chr8:48726264(-) A-I      intronic chr8:48698504(-) A-I      intronic chr8:48699376(-) A-I      intronic chr8:48797841(-) A-I      intronic chr8:48698971(-) A-I      intronic chr8:48793551(-) A-I      intronic chr8:48858724(-) A-I      intronic chr8:48835065(-) A-I      intronic chr8:48692236(-) A-I      intronic chr8:48819769(-) A-I      intronic chr8:48834791(-) A-I      intronic chr8:48748532(-) A-I      intronic chr8:48860247(-) A-I      intronic chr8:48693476(-) A-I      intronic chr8:48726274(-) A-I      intronic chr8:48797837(-) A-I      intronic chr8:48748530(-) A-I      intronic chr8:48790805(-) A-I      intronic chr8:48819779(-) A-I      intronic chr8:48834766(-) A-I      intronic chr8:48699401(-) A-I      intronic chr8:48797873(-) A-I      intronic chr8:48692289(-) A-I      intronic chr8:48818959(-) A-I      intronic chr8:48813285(-) A-I      intronic chr8:48797850(-) A-I      intronic chr8:48860574(-) A-I      intronic chr8:48819775(-) A-I      intronic chr8:48692652(-) A-I      intronic chr8:48779572(-) A-I      intronic chr8:48699455(-) A-I      intronic chr8:48828845(-) A-I      intronic chr8:48797941(-) A-I      intronic chr8:48797986(-) A-I      intronic chr8:48692649(-) A-I      intronic chr8:48721503(-) A-I      intronic chr8:48860941(-) A-I      intronic chr8:48819107(-) A-I      intronic chr8:48698519(-) A-I      intronic chr8:48698729(-) A-I      intronic chr8:48850593(-) A-I      intronic chr8:48850531(-) A-I      intronic chr8:48816978(-) A-I      intronic chr8:48849709(-) A-I      intronic chr8:48850410(-) A-I      intronic chr8:48698648(-) A-I      intronic chr8:48850562(-) A-I      intronic chr8:48797821(-) A-I      intronic chr8:48785932(-) A-I      intronic chr8:48835709(-) A-I      intronic chr8:48860145(-) A-I      intronic chr8:48797910(-) A-I      intronic chr8:48830606(-) A-I      intronic chr8:48692640(-) A-I      intronic chr8:48692506(-) A-I      intronic chr8:48695983(-) A-I      intronic chr8:48858554(-) A-I      intronic chr8:48860346(-) A-I      intronic chr8:48692218(-) A-I      intronic chr8:48692275(-) A-I      intronic chr8:48836988(-) A-I      intronic chr8:48792623(-) A-I      intronic chr8:48850551(-) A-I      intronic chr8:48850553(-) A-I      intronic chr8:48830652(-) A-I      intronic chr8:48835099(-) A-I      intronic chr8:48834601(-) A-I      intronic chr8:48858645(-) A-I      intronic chr8:48817868(-) A-I      intronic chr8:48817231(-) A-I      intronic chr8:48861289(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PRKDC	chr8:48699376(-) A-I intron -    15342557 chr8:48699383(-) A-I intron -    15342557 chr8:48699388(-) A-I intron -    15342557 chr8:48699401(-) A-I intron -    15342557 chr8:48699429(-) A-I intron -    15342557 chr8:48699435(-) A-I intron -    15342557 chr8:48699473(-) A-I intron -    15342557 chr8:48699483(-) A-I intron -    15342557 chr8:48699567(-) A-I intron -    15342557 chr8:48699579(-) A-I intron -    15342557 chr8:48700396(-) A-I intron -    15342557 chr8:48700781(-) A-I intron -    15342557 chr8:48692236(-) A-I intron -    22327324 chr8:48692762(-) A-I intron -    22327324 chr8:48861048(-) A-I intron -    22028664 chr8:48861051(-) A-I intron -    22028664 chr8:48861052(-) A-I intron -    22028664 chr8:48861067(-) A-I intron -    22028664 chr8:48861092(-) A-I intron -    22028664 chr8:48861122(-) A-I intron -    22028664 chr8:48861157(-) A-I intron -    22028664 chr8:48861158(-) A-I intron -    22028664 chr8:48861166(-) A-I intron -    22028664 chr8:48861184(-) A-I intron -    22028664 chr8:48861191(-) A-I intron -    22028664 chr8:48861194(-) A-I intron -    22028664 chr8:48861196(-) A-I intron -    22028664 chr8:48861215(-) A-I intron -    22028664 chr8:48698074(-) A-I intron -    21960545 chr8:48698147(-) A-I intron -    21960545 chr8:48698151(-) A-I intron -    21960545 chr8:48785226(-) T-C intron -    22484847 chr8:48687740(-) A-G intron -    22484847 chr8:48687741(-) A-G intron -    22484847 chr8:48688035(-) A-G intron -    22484847 chr8:48688087(-) A-G intron -    22484847 chr8:48692219(-) A-G intron -    22484847 chr8:48692236(-) A-G intron -    22484847 chr8:48692275(-) A-G intron -    22484847 chr8:48692327(-) A-G intron -    22484847 chr8:48692330(-) A-G intron -    22484847 chr8:48692333(-) A-G intron -    22484847 chr8:48692699(-) A-G intron -    22484847 chr8:48692762(-) A-G intron -    22484847 chr8:48693476(-) A-G intron -    22484847 chr8:48693479(-) A-G intron -    22484847 chr8:48698032(-) A-G intron -    22484847 chr8:48698036(-) A-G intron -    22484847 chr8:48698038(-) A-G intron -    22484847 chr8:48698074(-) A-G intron -    22484847 chr8:48698092(-) A-G intron -    22484847 chr8:48698200(-) A-G intron -    22484847 chr8:48698283(-) A-G intron -    22484847 chr8:48698504(-) A-G intron -    22484847 chr8:48698584(-) A-G intron -    22484847 chr8:48698648(-) A-G intron -    22484847 chr8:48698665(-) A-G intron -    22484847 chr8:48699401(-) A-G intron -    22484847 chr8:48699429(-) A-G intron -    22484847 chr8:48699470(-) A-G intron -    22484847 chr8:48705574(-) A-G intron -    22484847 chr8:48705718(-) A-G intron -    22484847 chr8:48705720(-) A-G intron -    22484847 chr8:48706009(-) A-G intron -    22484847 chr8:48711473(-) T-C intron -    22484847 chr8:48716331(-) A-G intron -    22484847 chr8:48716414(-) A-G intron -    22484847 chr8:48716433(-) A-G intron -    22484847 chr8:48720465(-) G-A intron -    22484847 chr8:48720757(-) A-G intron -    22484847 chr8:48721120(-) A-G intron -    22484847 chr8:48727621(-) T-C intron -    22484847 chr8:48728666(-) A-G intron -    22484847 chr8:48728667(-) A-G intron -    22484847 chr8:48748096(-) A-G intron -    22484847 chr8:48751016(-) A-T intron -    22484847 chr8:48751028(-) G-T intron -    22484847 chr8:48763511(-) A-G intron -    22484847 chr8:48787068(-) A-G intron -    22484847 chr8:48787359(-) A-G intron -    22484847 chr8:48787431(-) A-G intron -    22484847 chr8:48787504(-) A-G intron -    22484847 chr8:48787507(-) A-G intron -    22484847 chr8:48787521(-) A-G intron -    22484847 chr8:48789138(-) A-G intron -    22484847 chr8:48793525(-) A-G intron -    22484847 chr8:48793551(-) A-G intron -    22484847 chr8:48797804(-) A-G intron -    22484847 chr8:48797837(-) A-G intron -    22484847 chr8:48797841(-) A-G intron -    22484847 chr8:48797850(-) A-G intron -    22484847 chr8:48797873(-) A-G intron -    22484847 chr8:48797910(-) A-G intron -    22484847 chr8:48797937(-) A-G intron -    22484847 chr8:48797941(-) A-G intron -    22484847 chr8:48797946(-) A-G intron -    22484847 chr8:48798009(-) A-G intron -    22484847 chr8:48798272(-) A-G intron -    22484847 chr8:48798304(-) A-G intron -    22484847 chr8:48798309(-) A-G intron -    22484847 chr8:48798331(-) A-G intron -    22484847 chr8:48798371(-) A-G intron -    22484847 chr8:48798406(-) A-G intron -    22484847 chr8:48804218(-) A-G intron -    22484847 chr8:48804579(-) A-G intron -    22484847 chr8:48804604(-) A-G intron -    22484847 chr8:48804704(-) A-G intron -    22484847 chr8:48816978(-) A-G intron -    22484847 chr8:48816996(-) A-G intron -    22484847 chr8:48817026(-) A-G intron -    22484847 chr8:48817229(-) A-G intron -    22484847 chr8:48817231(-) A-G intron -    22484847 chr8:48817309(-) A-G intron -    22484847 chr8:48819028(-) A-G intron -    22484847 chr8:48819072(-) A-G intron -    22484847 chr8:48819086(-) A-G intron -    22484847 chr8:48819176(-) A-G intron -    22484847 chr8:48819739(-) A-G intron -    22484847 chr8:48819780(-) A-G intron -    22484847 chr8:48828845(-) A-G intron -    22484847 chr8:48829647(-) A-G intron -    22484847 chr8:48830507(-) A-G intron -    22484847 chr8:48830606(-) A-G intron -    22484847 chr8:48830652(-) A-G intron -    22484847 chr8:48833615(-) A-G intron -    22484847 chr8:48834478(-) A-G intron -    22484847 chr8:48834527(-) C-T intron -    22484847 chr8:48834601(-) A-G intron -    22484847 chr8:48834766(-) A-G intron -    22484847 chr8:48834791(-) A-G intron -    22484847 chr8:48835709(-) A-G intron -    22484847 chr8:48835726(-) A-G intron -    22484847 chr8:48835729(-) A-G intron -    22484847 chr8:48835768(-) A-G intron -    22484847 chr8:48835788(-) A-G intron -    22484847 chr8:48836988(-) A-G intron -    22484847 chr8:48849239(-) A-G intron -    22484847 chr8:48850528(-) A-G intron -    22484847 chr8:48850531(-) A-G intron -    22484847 chr8:48850551(-) A-G intron -    22484847 chr8:48850553(-) A-G intron -    22484847 chr8:48850593(-) A-G intron -    22484847 chr8:48850621(-) A-G intron -    22484847 chr8:48858463(-) A-G intron -    22484847 chr8:48858477(-) A-G intron -    22484847 chr8:48858478(-) A-G intron -    22484847 chr8:48858487(-) A-G intron -    22484847 chr8:48858554(-) A-G intron -    22484847 chr8:48858645(-) A-G intron -    22484847 chr8:48858791(-) A-G intron -    22484847 chr8:48858808(-) A-G intron -    22484847 chr8:48858809(-) A-G intron -    22484847 chr8:48860145(-) A-G intron -    22484847 chr8:48860148(-) A-G intron -    22484847 chr8:48860183(-) A-G intron -    22484847 chr8:48860224(-) A-G intron -    22484847 chr8:48860247(-) A-G intron -    22484847 chr8:48860250(-) A-G intron -    22484847 chr8:48860297(-) C-T intron -    22484847 chr8:48860302(-) A-G intron -    22484847 chr8:48860305(-) A-G intron -    22484847 chr8:48860319(-) A-G intron -    22484847 chr8:48860320(-) A-G intron -    22484847 chr8:48860346(-) A-G intron -    22484847 chr8:48860446(-) A-G intron -    22484847 chr8:48860559(-) A-G intron -    22484847 chr8:48860574(-) A-G intron -    22484847 chr8:48860586(-) A-G intron -    22484847 chr8:48860596(-) A-G intron -    22484847 chr8:48860621(-) A-G intron -    22484847 chr8:48860629(-) A-G intron -    22484847 chr8:48860637(-) A-G intron -    22484847 chr8:48860735(-) A-G intron -    22484847 chr8:48860843(-) A-G intron -    22484847 chr8:48860848(-) A-G intron -    22484847 chr8:48860852(-) A-G intron -    22484847 chr8:48860874(-) A-G intron -    22484847 chr8:48860896(-) A-G intron -    22484847 chr8:48860940(-) A-G intron -    22484847 chr8:48860941(-) A-G intron -    22484847 chr8:48861200(-) A-G intron -    22484847 chr8:48861201(-) A-G intron -    22484847 chr8:48861289(-) A-G intron -    22484847 chr8:48861294(-) A-G intron -    22484847 chr8:48862665(-) A-G intron -    22484847 chr8:48864301(-) C-T intron -    22484847 chr8:48864302(-) T-A intron -    22484847 chr8:48864303(-) T-C intron -    22484847 chr8:48871388(-) A-G intron -    22484847 chr8:48871434(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRKDC	chr8:48686248-48686249(-) m6A 3'UTR       24981863//22575960 chr8:48686257-48686258(-) m6A 3'UTR       24981863//22575960 chr8:48686413-48686414(-) m6A 3'UTR       24981863//22575960 chr8:48686639-48686640(-) m6A 3'UTR       22575960 chr8:48686762-48686763(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:48686782-48686783(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:48686794-48686795(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:48686816-48686817(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:48686841-48686842(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:48686866-48686867(-) Am 3'UTR//CDS//exon       - chr8:48686893-48686894(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:48689535-48689536(-) m6A CDS//exon//intron       24284625//24981863 chr8:48691072-48691073(-) m6A CDS//exon       27773535//22575960 chr8:48691095-48691096(-) m6A CDS//exon       27773535//22575960 chr8:48691107-48691108(-) m6A CDS//exon       27773535//22575960 chr8:48695001-48695002(-) m6A CDS//exon       22575960 chr8:48695052-48695053(-) m6A CDS//exon       22575960 chr8:48695064-48695065(-) m6A CDS//exon       22575960 chr8:48695093-48695094(-) m6A CDS//exon       27773535//22575960 chr8:48697762-48697763(-) m6A CDS       26404942 chr8:48697768-48697769(-) m6A CDS       26404942 chr8:48697830-48697831(-) m6A CDS       26404942 chr8:48697854-48697855(-) m6A CDS       26404942 chr8:48715986-48715987(-) m6A CDS       27773535 chr8:48716017-48716018(-) m6A CDS       24981863//27773535 chr8:48719713-48719714(-) m6A CDS       24981863//26404942//27773535 chr8:48719796-48719797(-) Cm CDS       - chr8:48719806-48719807(-) m6A CDS       24981863 chr8:48740850-48740851(-) Gm CDS       - chr8:48743212-48743213(-) Cm CDS       - chr8:48743226-48743227(-) m6A CDS       24981863//27773535 chr8:48744435-48744436(-) m6A CDS       24981863//27773535//22575960 chr8:48744468-48744469(-) m6A CDS       24981863//27773535//22575960 chr8:48746949-48746950(-) m1A CDS       26863410 chr8:48748904-48748905(-) m6A CDS       22575960 chr8:48748997-48748998(-) m6A CDS       22575960 chr8:48749024-48749025(-) m6A CDS       22575960 chr8:48752720-48752721(-) m6A CDS       22575960 chr8:48752737-48752738(-) m6A CDS       22575960 chr8:48761719-48761720(-) m6A CDS       22575960 chr8:48761738-48761739(-) m6A CDS       22575960 chr8:48771536-48771537(-) m6A CDS       22575960 chr8:48772198-48772199(-) m6A CDS       22575960 chr8:48772205-48772206(-) m6A CDS       22575960 chr8:48774641-48774642(-) Y CDS//exon       26075521 chr8:48775038-48775039(-) m6A CDS//exon       26404942 chr8:48775075-48775076(-) m6A CDS//exon       26404942 chr8:48775969-48775970(-) m6A CDS//exon       26404942 chr8:48775979-48775980(-) m6A CDS//exon       26404942 chr8:48776069-48776070(-) Gm CDS//exon       - chr8:48792150-48792151(-) Tm CDS       - chr8:48801769-48801770(-) m6A CDS       22575960 chr8:48802839-48802840(-) m6A CDS       22575960 chr8:48802924-48802925(-) m6A CDS       22575960 chr8:48805723-48805724(-) m6A CDS       22575960 chr8:48812949-48812950(-) Cm CDS       - chr8:48872618-48872619(-) m6A CDS       24284625//25456834//24981863//27773536//22575960 chr8:48872634-48872635(-) m6A CDS       24284625//25456834//24981863//27773536//22575960 chr8:48872695-48872696(-) m6A 5'UTR       24284625//25456834//24981863//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PRKDC	Chromatin HCC cell line (HepG2)|K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: bkv-miR-B1-5p
Interactor2: PRKDC

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg