Detail Information

Basic Information:


  VIRBase ID:  

VHID00659193

  Virus:  

Human polyomavirus 1 (BKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      bkv-miR-B1-5p:           GPM6B:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol bkv-miR-B1-5p GPM6B
miRBase
Accession/Entrez ID		 MIMAT0009149 2824
Organism Human polyomavirus 1 (BKV) Homo sapiens
Category miRNA mRNA
Alias - M6B

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GPM6B
chrX:13844632(-) A-I      intronic
chrX:13939844(-) A-I      intronic
chrX:13939854(-) A-I      intronic
chrX:13939867(-) A-I      intronic
chrX:13939874(-) A-I      intronic
chrX:13939876(-) A-I      intronic
chrX:13939868(-) A-I      intronic
chrX:13844660(-) A-I      intronic
chrX:13851617(-) A-I      intronic
chrX:13851807(-) A-I      intronic
chrX:13844658(-) A-I      intronic
chrX:13851805(-) A-I      intronic
chrX:13791435(-) A-I      3'UTR
chrX:13791462(-) A-I      3'UTR
chrX:13791454(-) A-I      3'UTR
chrX:13791430(-) A-I      3'UTR
chrX:13791431(-) A-I      3'UTR
chrX:13791434(-) A-I      3'UTR
chrX:13791437(-) A-I      3'UTR
chrX:13791439(-) A-I      3'UTR
chrX:13791438(-) A-I      3'UTR
chrX:13791440(-) A-I      3'UTR
chrX:13791442(-) A-I      3'UTR
chrX:13791445(-) A-I      3'UTR
chrX:13791453(-) A-I      3'UTR
chrX:13943565(-) A-I      intronic
chrX:13933350(-) A-I      intronic
chrX:13803421(-) A-I      intronic
chrX:13890482(-) A-I      intronic
chrX:13914851(-) A-I      intronic
chrX:13871460(-) A-I      intronic
chrX:13931477(-) A-I      intronic
chrX:13898732(-) A-I      intronic
chrX:13938766(-) A-I      intronic
chrX:13844606(-) A-I      intronic
chrX:13827721(-) A-I      intronic
chrX:13827651(-) A-I      intronic
chrX:13938203(-) A-I      intronic
chrX:13827638(-) A-I      intronic
chrX:13844816(-) A-I      intronic
chrX:13931303(-) A-I      intronic
chrX:13844603(-) A-I      intronic
chrX:13944062(-) A-I      intronic
chrX:13935119(-) A-I      intronic
chrX:13943646(-) A-I      intronic
chrX:13885367(-) A-I      intronic
chrX:13808011(-) A-I      intronic
chrX:13808197(-) A-I      intronic
chrX:13873190(-) A-I      intronic
chrX:13925689(-) A-I      intronic
chrX:13941195(-) A-I      intronic
chrX:13939792(-) A-I      intronic
chrX:13927319(-) A-I      intronic
chrX:13885383(-) A-I      intronic
chrX:13805517(-) A-I      intronic
chrX:13944358(-) A-I      intronic
chrX:13871660(-) A-I      intronic
chrX:13935291(-) A-I      intronic
chrX:13941212(-) A-I      intronic
chrX:13914815(-) A-I      intronic
chrX:13828190(-) A-I      intronic
chrX:13827650(-) A-I      intronic
chrX:13925790(-) A-I      intronic
chrX:13805486(-) A-I      intronic
chrX:13864781(-) A-I      intronic
chrX:13805575(-) A-I      intronic
chrX:13830377(-) A-I      intronic
chrX:13932120(-) A-I      intronic
chrX:13814174(-) A-I      intronic
chrX:13925786(-) A-I      intronic
chrX:13953373(-) A-I      intronic
chrX:13927438(-) A-I      intronic
chrX:13914825(-) A-I      intronic
chrX:13808264(-) A-I      intronic
chrX:13890438(-) A-I      intronic
chrX:13942454(-) A-I      intronic
chrX:13867944(-) A-I      intronic
chrX:13864748(-) A-I      intronic
chrX:13805628(-) A-I      intronic
chrX:13943524(-) A-I      intronic
chrX:13939791(-) A-I      intronic
chrX:13931968(-) A-I      intronic
chrX:13914164(-) A-I      intronic
chrX:13864817(-) A-I      intronic
chrX:13935074(-) A-I      intronic
chrX:13943584(-) A-I      intronic
chrX:13939826(-) A-I      intronic
chrX:13890492(-) A-I      intronic
chrX:13808245(-) A-I      intronic
chrX:13931371(-) A-I      intronic
chrX:13932074(-) A-I      intronic
chrX:13927526(-) A-I      intronic
chrX:13933304(-) A-I      intronic
chrX:13927407(-) A-I      intronic
chrX:13808007(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GPM6B
chrX:13791020-13791021(-) m6A 3'UTR//CDS//exon       24981863
chrX:13791050-13791051(-) m6A 3'UTR//CDS//exon       24981863
chrX:13791056-13791057(-) m6A 3'UTR//CDS//exon       24981863
chrX:13791854-13791855(-) m6A 3'UTR//intron       24981863//22608085
chrX:13791864-13791865(-) m6A 3'UTR//intron       24981863//22608085
chrX:13791901-13791902(-) m6A 3'UTR//intron       24981863//22608085
chrX:13825884-13825885(-) m6A 5'UTR//CDS//intron       24981863
chrX:13834981-13834982(-) m6A 5'UTR//CDS//intron       24981863
chrX:13835004-13835005(-) m6A 5'UTR//CDS//intron       24981863
chrX:13835052-13835053(-) m6A 5'UTR//intron       24981863
chrX:13835072-13835073(-) m6A 5'UTR//intron       24981863
chrX:13835145-13835146(-) m6A 5'UTR//intron       24981863
chrX:13835168-13835169(-) m6A 5'UTR//intron       24981863
chrX:13835188-13835189(-) m6A 5'UTR//intron       24981863
chrX:13835221-13835222(-) m6A 5'UTR//intron       24981863
chrX:13956706-13956707(-) m6A 5'UTR       25456834//27773536
chrX:13956714-13956715(-) m6A 5'UTR       25456834//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GPM6B
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: bkv-miR-B1-5p
Interactor2: GPM6B

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

Starting a new search, please wait ...