Basic Information:

  VIRBase ID:  

VHID00659177

  Virus:  

Human polyomavirus 1 (BKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      bkv-miR-B1-5p:  MIMAT0009149          GMFB:  NM_004124     

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Interactor Information:

	Interactor1	Interactor2
Symbol	bkv-miR-B1-5p	GMFB
miRBase Accession/Entrez ID	MIMAT0009149	2764
Organism	Human polyomavirus 1 (BKV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GMF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GMFB	chr14:54954141(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GMFB	chr14:54942712-54942713(-) m6A 3'UTR       27773535 chr14:54944747-54944748(-) m6A 3'UTR//exon       27773535 chr14:54944799-54944800(-) m6A 3'UTR//exon       27773535 chr14:54944823-54944824(-) m6A 3'UTR//CDS//exon       27773535 chr14:54944851-54944852(-) m6A 3'UTR//CDS//exon       27773535 chr14:54946512-54946513(-) m6A 3'UTR//CDS//exon       27773535 chr14:54946520-54946521(-) m6A 3'UTR//CDS//exon       27773535 chr14:54946563-54946564(-) m6A 3'UTR//CDS//exon       27773535 chr14:54950405-54950406(-) m6A CDS//exon       24209618//24981863//27773535 chr14:54950684-54950685(-) m6A CDS//intron       24209618//24981863 chr14:54950736-54950737(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GMFB	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: bkv-miR-B1-5p
Interactor2: GMFB

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg