Basic Information:

  VIRBase ID:  

VHID00658719

  Virus:  

Human polyomavirus 1 (BKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      bkv-miR-B1-5p:  MIMAT0009149          JAG1:  NM_000214     

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Interactor Information:

	Interactor1	Interactor2
Symbol	bkv-miR-B1-5p	JAG1
miRBase Accession/Entrez ID	MIMAT0009149	182
Organism	Human polyomavirus 1 (BKV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AGS//AGS1//AHD//AWS//CD339//DCHE//HJ1//JAGL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	JAG1	chr20:10646887(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	JAG1	chr20:10618350-10618351(-) m6A 3'UTR       24981863//27773535 chr20:10618424-10618425(-) m6A 3'UTR//exon       25456834//24981863//27773535 chr20:10618448-10618449(-) m6A 3'UTR//exon       25456834//24981863//27773535 chr20:10618469-10618470(-) m6A 3'UTR//exon       25456834//24981863//27773535 chr20:10618493-10618494(-) m6A 3'UTR//exon       25456834//24981863 chr20:10618890-10618891(-) m6A 3'UTR//intron       26404942 chr20:10619566-10619567(-) m6A 3'UTR//intron       26404942 chr20:10619628-10619629(-) m6A 3'UTR//intron       24981863//26404942 chr20:10619701-10619702(-) m6A 3'UTR//intron       24981863//26404942 chr20:10620089-10620090(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr20:10620141-10620142(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr20:10620167-10620168(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr20:10620191-10620192(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr20:10620200-10620201(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr20:10620205-10620206(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr20:10620213-10620214(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr20:10620218-10620219(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr20:10620226-10620227(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr20:10620263-10620264(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr20:10620317-10620318(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr20:10620351-10620352(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27773536//22575960//22608085 chr20:10620374-10620375(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr20:10620380-10620381(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr20:10620418-10620419(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr20:10620431-10620432(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr20:10620443-10620444(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr20:10620476-10620477(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr20:10621433-10621434(-) m6A CDS//exon       24284625 chr20:10621782-10621783(-) m6A CDS//exon       27773535 chr20:10622144-10622145(-) m6A CDS//exon       27773535 chr20:10622187-10622188(-) m6A CDS//exon       27773535 chr20:10625620-10625621(-) m6A CDS//exon       26404942//27773535 chr20:10625805-10625806(-) m6A CDS//exon       26404942//27773535 chr20:10628633-10628634(-) m6A 3'UTR//CDS//exon       26404942 chr20:10628651-10628652(-) m6A 3'UTR//CDS//exon       26404942 chr20:10628666-10628667(-) m6A 3'UTR//CDS//exon       26404942 chr20:10639154-10639155(-) m6A CDS//exon       26404942 chr20:10639185-10639186(-) m6A CDS//exon       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	JAG1	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: bkv-miR-B1-5p
Interactor2: JAG1

Evidence Support:

Prediction-Evidence	cRep//PITA//Targetscan
Support Database	RepTar//VmiReg