Detail Information

Basic Information:


  VIRBase ID:  

VHID00649079

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-9 Akap2
miRBase
Accession/Entrez ID		 MIMAT0001573 Akap2
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Akap2
chr9:112900457(+) A-I exon CDS    19478186

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Akap2
chr4:57757637-57757638(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085
chr4:57757659-57757660(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085
chr4:57757669-57757670(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085
chr4:57782308-57782309(+) m6A 5'UTR//intron       25569111
chr4:57829423-57829424(+) m6A CDS//intron       25683224//24981863//25569111
chr4:57845296-57845297(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111
chr4:57854166-57854167(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111
chr4:57854239-57854240(+) m6A 5'UTR//intron       25683224//25412662//25569111
chr4:57854496-57854497(+) m6A 5'UTR//intron       25569111
chr4:57854610-57854611(+) m6A 5'UTR//CDS//intron       25683224//25412662//24981863//25569111
chr4:57854670-57854671(+) m6A 5'UTR//CDS//intron       25683224//25412662//24981863//25569111
chr4:57854742-57854743(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57854808-57854809(+) m6A CDS//intron       25683224//24981863//25569111
chr4:57854885-57854886(+) m6A CDS//intron       25683224//24981863//25569111
chr4:57854974-57854975(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855070-57855071(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855093-57855094(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855105-57855106(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855231-57855232(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855416-57855417(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085
chr4:57855442-57855443(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085
chr4:57855646-57855647(+) m6A CDS//intron       25683224//25412662//24981863//25456834//25569111
chr4:57855664-57855665(+) m6A CDS//intron       25683224//25412662//24981863//25456834//25569111
chr4:57855749-57855750(+) m6A CDS//intron       25683224//25412662//24981863//25456834//25569111
chr4:57855805-57855806(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855828-57855829(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855850-57855851(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57855869-57855870(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57856021-57856022(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr4:57856101-57856102(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr4:57856149-57856150(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856202-57856203(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856227-57856228(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856259-57856260(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856281-57856282(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856310-57856311(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856319-57856320(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr4:57856528-57856529(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085
chr4:57856571-57856572(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085
chr4:57856659-57856660(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57856674-57856675(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57856751-57856752(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr4:57856861-57856862(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856883-57856884(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57856951-57856952(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57857012-57857013(+) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr4:57857027-57857028(+) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr4:57883042-57883043(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111
chr4:57883112-57883113(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57883128-57883129(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57883139-57883140(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57883152-57883153(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57883160-57883161(+) m6A CDS//intron       25683224//25412662//24981863//25569111
chr4:57892956-57892957(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr4:57892967-57892968(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:57892986-57892987(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:57893017-57893018(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:57893052-57893053(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:57893075-57893076(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:57893095-57893096(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960
chr4:57893126-57893127(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893133-57893134(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893144-57893145(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893152-57893153(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893174-57893175(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893194-57893195(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893200-57893201(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893256-57893257(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960
chr4:57893281-57893282(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893324-57893325(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:57893598-57893599(+) m6A 3'UTR       25683224//25412662//24981863//25569111
chr4:57893691-57893692(+) m6A 3'UTR       25683224//24981863//25569111
chr4:57893734-57893735(+) m6A 3'UTR       25683224//24981863
chr4:57893758-57893759(+) m6A 3'UTR       25683224
chr4:57893798-57893799(+) m6A 3'UTR       25683224//24981863
chr4:57893877-57893878(+) m6A 3'UTR       25683224//24981863
chr4:57893883-57893884(+) m6A 3'UTR       25683224//24981863
chr4:57893894-57893895(+) m6A 3'UTR       25683224//24981863
chr4:57893910-57893911(+) m6A 3'UTR       25683224//24981863
chr4:57893977-57893978(+) m6A 3'UTR       25683224//24981863
chr4:57894096-57894097(+) m6A 3'UTR       25683224//24981863//25456834
chr4:57894103-57894104(+) m6A 3'UTR       25683224//24981863//25456834
chr4:57894138-57894139(+) m6A 3'UTR       25683224//24981863//25456834
chr4:57894183-57894184(+) m6A 3'UTR       25683224//24981863//25456834
chr4:57894780-57894781(+) m6A 3'UTR       24981863
chr4:57895180-57895181(+) m6A 3'UTR       25683224//22608085
chr4:57895375-57895376(+) m6A 3'UTR       25683224//22608085
chr4:57895443-57895444(+) m6A 3'UTR       25683224//22608085
chr4:57895595-57895596(+) m6A 3'UTR       25683224//22608085
chr4:57895996-57895997(+) m6A 3'UTR       25683224//22608085
chr4:57896017-57896018(+) m6A 3'UTR       25683224//22608085
chr4:57896237-57896238(+) m6A 3'UTR       25683224//22608085
chr4:57896251-57896252(+) m6A 3'UTR       25683224//22608085
chr4:57896379-57896380(+) m6A 3'UTR       25683224//22608085
chr9:112811032-112811033(+) m6A CDS       24981863
chr9:112811050-112811051(+) m6A CDS       24981863
chr9:112811087-112811088(+) m6A CDS       24981863
chr9:112811098-112811099(+) m6A CDS       24981863
chr9:112811106-112811107(+) m6A CDS       24981863
chr9:112898455-112898456(+) m6A 5'UTR//CDS//exon//intron       24284625//24209618
chr9:112898515-112898516(+) m6A 5'UTR//CDS//exon//intron       24284625//24209618//24981863
chr9:112898587-112898588(+) m6A CDS//exon//intron       24284625//24209618//24981863
chr9:112898742-112898743(+) m6A CDS//intron       24284625//24981863//22608085
chr9:112898819-112898820(+) m6A CDS//intron       24284625//24981863//22608085
chr9:112898832-112898833(+) m6A CDS//intron       24284625//24981863//22608085
chr9:112898907-112898908(+) m6A CDS//intron       24284625//25456834//24981863//22608085
chr9:112898950-112898951(+) m6A CDS//intron       24284625//25456834//24981863//22608085
chr9:112899076-112899077(+) m6A CDS//intron       24284625//24981863
chr9:112899122-112899123(+) m6A CDS//intron       24284625//24981863//22608085
chr9:112899261-112899262(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr9:112899287-112899288(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr9:112899322-112899323(+) Am CDS//intron       -
chr9:112899344-112899345(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr9:112899460-112899461(+) m6A CDS//intron       24284625//24981863//22608085
chr9:112899500-112899501(+) m6A CDS//intron       24284625//24981863
chr9:112899610-112899611(+) m6A CDS//intron       24284625//25456834//24981863//22608085
chr9:112899632-112899633(+) m6A CDS//intron       24284625//25456834//24981863//22608085
chr9:112899650-112899651(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085
chr9:112899661-112899662(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085
chr9:112899686-112899687(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:112899711-112899712(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:112899803-112899804(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:112899984-112899985(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112900009-112900010(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112900041-112900042(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112900092-112900093(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112900101-112900102(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112900189-112900190(+) m6A CDS//intron       24284625//24981863//26404942//22608085
chr9:112900293-112900294(+) m6A CDS//intron       24284625//24209618//24981863//22608085
chr9:112900322-112900323(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085
chr9:112900459-112900460(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr9:112900536-112900537(+) m6A CDS//exon//intron       24284625//24209618//22608085
chr9:112900661-112900662(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr9:112900668-112900669(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr9:112900736-112900737(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22608085
chr9:112900767-112900768(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22608085
chr9:112900797-112900798(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535
chr9:112900809-112900810(+) m6A CDS//exon//intron       24284625//24209618//24981863
chr9:112918617-112918618(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618
chr9:112918687-112918688(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr9:112918714-112918715(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr9:112918727-112918728(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr9:112918735-112918736(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr9:112930766-112930767(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//22608085
chr9:112930777-112930778(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085
chr9:112930816-112930817(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:112930824-112930825(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:112930858-112930859(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:112930877-112930878(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr9:112930901-112930902(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr9:112930959-112930960(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr9:112930966-112930967(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr9:112930991-112930992(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr9:112931053-112931054(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr9:112931058-112931059(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr9:112931097-112931098(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112931103-112931104(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112931127-112931128(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr9:112931359-112931360(+) m6A 3'UTR       24981863
chr9:112931398-112931399(+) m6A 3'UTR       24981863
chr9:112931420-112931421(+) m6A 3'UTR       24981863
chr9:112931466-112931467(+) m6A 3'UTR       24981863
chr9:112931650-112931651(+) m6A 3'UTR       24981863
chr9:112931711-112931712(+) m6A 3'UTR       24981863//27773535
chr9:112931797-112931798(+) m1A 3'UTR       26863196
chr9:112931835-112931836(+) m6A 3'UTR       24981863//27773535//22608085
chr9:112932999-112933000(+) m6A 3'UTR       -
chr9:112933061-112933062(+) m6A 3'UTR       -
chr9:112933128-112933129(+) m6A 3'UTR       24981863
chr9:112933159-112933160(+) m6A 3'UTR       24981863
chr9:112933173-112933174(+) m6A 3'UTR       24981863
chr9:112933628-112933629(+) m6A 3'UTR       24284625
chr9:112933895-112933896(+) m6A 3'UTR       24981863
chr9:112933920-112933921(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-9
Interactor2: Akap2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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