Basic Information:

  VIRBase ID:  

VHID00649032

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Trim63:  NM_001369245     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Trim63
miRBase Accession/Entrez ID	MIMAT0001573	433766
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	MuRF//MuRF1//RF1//Rnf//Rnf28

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Trim63	chr4:134315144-134315145(+) m6A 5'UTR       25456834//25569111 chr4:134315171-134315172(+) m6A 5'UTR       25456834//25569111 chr4:134315177-134315178(+) m6A 5'UTR       25456834//25569111 chr4:134315202-134315203(+) m6A 5'UTR       25456834//25569111 chr4:134315269-134315270(+) m6A CDS//exon       25456834//25569111 chr4:134321258-134321259(+) m6A CDS//exon       25412662 chr4:134323179-134323180(+) m6A CDS//exon       25683224 chr4:134323189-134323190(+) m6A CDS//exon       25683224 chr4:134325620-134325621(+) m6A CDS//exon       25683224//25456834//25412662 chr4:134325639-134325640(+) m6A CDS//exon       25683224//25456834//25412662 chr4:134325645-134325646(+) m6A CDS//exon       25683224//25456834//25412662 chr4:134325660-134325661(+) m6A CDS//exon       25683224//25456834//25412662 chr4:134325667-134325668(+) m6A CDS//exon       25683224//25456834//25412662 chr4:134325704-134325705(+) m6A CDS//exon       25683224//25456834//25412662 chr4:134328932-134328933(+) m6A 3'UTR//exon       25683224//25412662//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Trim63	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Trim63

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar