Basic Information:

  VIRBase ID:  

VHID00648993

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Rnf225:  NM_029809     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Rnf225
miRBase Accession/Entrez ID	MIMAT0001573	381845
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2310014L17Rik//AV237412//C77118

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rnf225	chr7:12928136-12928137(+) m6A CDS       25412662 chr7:12928603-12928604(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928669-12928670(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928681-12928682(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928709-12928710(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928742-12928743(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928772-12928773(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928783-12928784(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928816-12928817(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928847-12928848(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:12928933-12928934(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr7:12929000-12929001(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr7:12929009-12929010(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929015-12929016(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929025-12929026(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929050-12929051(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929203-12929204(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr7:12929275-12929276(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:12929288-12929289(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:12929310-12929311(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:12929382-12929383(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:12929428-12929429(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:12929481-12929482(+) m6A 3'UTR       25683224//24981863//25569111 chr7:12929517-12929518(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929559-12929560(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929569-12929570(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929604-12929605(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:12929654-12929655(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr7:12929840-12929841(+) m6A 3'UTR       25683224 chr7:12929897-12929898(+) m6A 3'UTR       25683224//24981863 chr7:12929929-12929930(+) m6A 3'UTR       25683224//24981863//25569111 chr7:12930050-12930051(+) m6A 3'UTR       25683224//24981863//25569111 chr7:12930192-12930193(+) m6A 3'UTR       25683224//25412662 chr7:12930204-12930205(+) m6A 3'UTR       25412662 chr7:12930214-12930215(+) m6A 3'UTR       25412662 chr7:12930236-12930237(+) m6A 3'UTR       25412662 chr7:12930307-12930308(+) m6A 3'UTR       25412662 chr7:12930714-12930715(+) m6A 3'UTR       24981863 chr7:12930764-12930765(+) m6A 3'UTR       24981863 chr7:12930894-12930895(+) m6A 3'UTR       24981863//25456834 chr7:12930908-12930909(+) m6A 3'UTR       24981863//25456834 chr7:12930918-12930919(+) m6A 3'UTR       24981863//25456834 chr7:12930973-12930974(+) m6A 3'UTR       24981863//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rnf225	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Rnf225

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar