Basic Information:

  VIRBase ID:  

VHID00648981

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Rc3h1:  NM_001024952     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Rc3h1
miRBase Accession/Entrez ID	MIMAT0001573	381305
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	5730557L09Rik//Gm551//mKIAA2025//N28103//ro

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rc3h1	chr1:160906439-160906440(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr1:160906592-160906593(+) m6A 5'UTR       25412662//24981863//25569111 chr1:160906661-160906662(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr1:160906690-160906691(+) m6A 5'UTR       25683224//24981863//25569111 chr1:160930021-160930022(+) m6A 5'UTR       25683224//24981863//25569111 chr1:160930170-160930171(+) m6A CDS       25683224//24981863//25569111 chr1:160930182-160930183(+) m6A CDS       25683224//24981863//25569111 chr1:160930244-160930245(+) m6A CDS       25683224//24981863//25569111 chr1:160930275-160930276(+) m6A CDS       25683224//24981863//25569111 chr1:160930291-160930292(+) m6A CDS       25683224//24981863//25569111 chr1:160930312-160930313(+) m6A CDS       25683224//24981863 chr1:160942546-160942547(+) m6A CDS       25683224//22608085 chr1:160942581-160942582(+) m6A CDS       25683224//22608085 chr1:160942604-160942605(+) m6A CDS       25683224//22608085 chr1:160946593-160946594(+) m6A CDS       25683224//22608085 chr1:160946600-160946601(+) m6A CDS       25683224//22608085 chr1:160946615-160946616(+) m6A CDS       25683224//22608085 chr1:160946625-160946626(+) m6A CDS       25683224//22608085 chr1:160946648-160946649(+) m6A CDS       25683224//22608085 chr1:160948328-160948329(+) m6A CDS       25683224//22608085 chr1:160954847-160954848(+) m6A CDS       25683224//24981863//25569111 chr1:160954903-160954904(+) m6A CDS       25683224//24981863//25569111 chr1:160955135-160955136(+) m6A CDS       25683224//22608085 chr1:160959499-160959500(+) m6A CDS       25683224//24981863//22608085 chr1:160959513-160959514(+) m6A CDS       25683224//24981863//22608085 chr1:160962307-160962308(+) m6A CDS       25683224//24981863//22608085 chr1:160962361-160962362(+) m6A CDS       25683224 chr1:160963751-160963752(+) Y CDS//exon       26075521 chr1:160964986-160964987(+) m6A CDS       25683224 chr1:160965068-160965069(+) m6A CDS       25683224 chr1:160965102-160965103(+) m6A CDS       25683224//22608085 chr1:160965676-160965677(+) m6A CDS       25683224//22608085 chr1:160965691-160965692(+) m6A CDS       25683224//24981863//22608085 chr1:160965704-160965705(+) m6A CDS       25683224//24981863//22608085 chr1:160965751-160965752(+) m6A CDS       25683224//24981863//25569111 chr1:160965769-160965770(+) m6A CDS       25683224//24981863//25569111 chr1:160967699-160967700(+) m6A CDS       25683224//24981863//25569111 chr1:160967704-160967705(+) m6A CDS       25683224//24981863//25569111 chr1:160967729-160967730(+) m6A CDS       25683224//24981863//25569111 chr1:160967874-160967875(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:160967932-160967933(+) m6A 3'UTR       25683224//25456834//24981863 chr1:160967945-160967946(+) m6A 3'UTR       25683224//25456834//24981863 chr1:160968053-160968054(+) m6A 3'UTR       25683224 chr1:160968779-160968780(+) m6A 3'UTR       25683224//22608085 chr1:160968795-160968796(+) m6A 3'UTR       25683224//22608085 chr1:160968801-160968802(+) m6A 3'UTR       25683224//22608085 chr1:160968808-160968809(+) m6A 3'UTR       25683224//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Rc3h1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar