Basic Information:

  VIRBase ID:  

VHID00648884

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Apba1:  NM_177034     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Apba1
miRBase Accession/Entrez ID	MIMAT0001573	319924
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	6430513E09Rik//Lin//Lin-10//Mi//Min//Mint//Mint1//Urop11//X11//X11a//X11alpha

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Apba1	chr19:23759050-23759051(+) m6A 5'UTR       25412662//24981863 chr19:23892809-23892810(+) m6A CDS       25412662//24981863 chr19:23892915-23892916(+) m6A CDS       25412662//24981863 chr19:23892965-23892966(+) m6A CDS       25412662//24981863 chr19:23893085-23893086(+) m6A CDS       25412662//24981863 chr19:23893601-23893602(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893622-23893623(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893691-23893692(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893712-23893713(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893743-23893744(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893801-23893802(+) m6A CDS       25412662//24981863//25569111//22608085 chr19:23893874-23893875(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893903-23893904(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893909-23893910(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893970-23893971(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23893988-23893989(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr19:23917559-23917560(+) m6A CDS       25683224//24981863//22608085 chr19:23917576-23917577(+) m6A CDS       25683224//24981863//22608085 chr19:23917636-23917637(+) m6A CDS       25683224//24981863//22608085 chr19:23917641-23917642(+) m6A CDS       25683224//24981863//22608085 chr19:23933736-23933737(+) m6A CDS       25683224//22608085 chr19:23934776-23934777(+) m6A CDS       25683224//22608085 chr19:23934787-23934788(+) m6A CDS       25683224//22608085 chr19:23934801-23934802(+) m6A CDS       25683224//22608085 chr19:23934920-23934921(+) m6A CDS       25412662//22608085 chr19:23936443-23936444(+) m6A CDS       25412662//22608085 chr19:23936502-23936503(+) m6A CDS       25412662//22608085 chr19:23937562-23937563(+) m6A CDS       25683224//22608085 chr19:23944020-23944021(+) m6A CDS       25683224//22608085 chr19:23944089-23944090(+) m6A CDS       25683224//22608085 chr19:23944938-23944939(+) m6A CDS       25683224//24981863 chr19:23945721-23945722(+) m6A CDS       25683224//25412662//24981863 chr19:23945846-23945847(+) m6A 3'UTR       25683224//25412662//24981863//22608085 chr19:23945898-23945899(+) m6A 3'UTR       25683224//25412662//24981863//22608085 chr19:23945956-23945957(+) m6A 3'UTR       24981863 chr19:23947005-23947006(+) m6A 3'UTR       25683224//22608085 chr19:23947030-23947031(+) m6A 3'UTR       25683224//22608085 chr19:23947507-23947508(+) m6A 3'UTR       24981863 chr19:23947545-23947546(+) m6A 3'UTR       24981863 chr19:23947704-23947705(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947741-23947742(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947764-23947765(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947821-23947822(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947839-23947840(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947847-23947848(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947958-23947959(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947968-23947969(+) m6A 3'UTR       25683224//24981863//26404942 chr19:23947998-23947999(+) m6A 3'UTR       25683224//25412662//24981863//26404942 chr19:23948037-23948038(+) m6A 3'UTR       25412662//24981863//26404942 chr19:23948056-23948057(+) m6A 3'UTR       25412662//24981863//26404942 chr19:23948076-23948077(+) m6A 3'UTR       25412662//24981863//26404942 chr19:23948091-23948092(+) m6A 3'UTR       25412662//24981863//26404942 chr19:23948497-23948498(+) m6A 3'UTR       25412662//24981863 chr19:23948628-23948629(+) m6A 3'UTR       25412662//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Apba1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar