Basic Information:

  VIRBase ID:  

VHID00648861

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Sec22a:  NM_133704     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Sec22a
miRBase Accession/Entrez ID	MIMAT0001573	317717
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1810005C06Rik//Sec22//Sec22l2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Sec22a	chr16:35319989(-) A-I      intronic chr16:35319993(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Sec22a	chr16:35319903(-) A-I intron -    22524474 chr16:35319907(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sec22a	chr16:35312646-35312647(-) m6A 3'UTR       24981863 chr16:35312674-35312675(-) m6A 3'UTR       25456834//24981863 chr16:35312704-35312705(-) m6A 3'UTR       25456834//24981863 chr16:35312767-35312768(-) m6A 3'UTR       25456834//24981863 chr16:35312806-35312807(-) m6A 3'UTR       25456834//24981863 chr16:35312812-35312813(-) m6A 3'UTR       25456834//24981863 chr16:35313461-35313462(-) m6A 3'UTR       24981863//25412662//22608085 chr16:35313672-35313673(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr16:35313717-35313718(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr16:35313769-35313770(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr16:35313838-35313839(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr16:35313907-35313908(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr16:35313920-35313921(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr16:35314006-35314007(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr16:35314036-35314037(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr16:35314194-35314195(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr16:35318823-35318824(-) m6A CDS//exon       25456834//24981863//25412662//25569111 chr16:35348852-35348853(-) m6A CDS       22608085 chr16:35348869-35348870(-) m6A CDS       22608085 chr16:35361613-35361614(-) m6A CDS//exon       25569111 chr16:35361697-35361698(-) m6A CDS//exon       25456834//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Sec22a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar