Basic Information:

  VIRBase ID:  

VHID00648808

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Sh3pxd2b:  NM_177364     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Sh3pxd2b
miRBase Accession/Entrez ID	MIMAT0001573	268396
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Fad4//fad49//G431001E03Rik//Tks//Tks4//TSK4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sh3pxd2b	chr11:32381446-32381447(+) m6A CDS//exon       25683224//25569111 chr11:32381468-32381469(+) m6A CDS//exon       25683224//25569111 chr11:32381476-32381477(+) m6A CDS//exon       25683224//25569111 chr11:32411510-32411511(+) m6A CDS       25683224//25412662 chr11:32411549-32411550(+) m6A CDS       25683224//25412662//24981863 chr11:32414247-32414248(+) m6A CDS       25683224//25412662//24981863 chr11:32414367-32414368(+) m6A CDS       25683224//25412662//24981863 chr11:32415944-32415945(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32415961-32415962(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32417157-32417158(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422115-32422116(+) m6A CDS       25683224//24981863//25412662//25569111 chr11:32422203-32422204(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32422237-32422238(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32422269-32422270(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32422293-32422294(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32422335-32422336(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:32422371-32422372(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:32422456-32422457(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:32422548-32422549(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:32422558-32422559(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:32422570-32422571(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:32422707-32422708(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422741-32422742(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422759-32422760(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422778-32422779(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422800-32422801(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422837-32422838(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422939-32422940(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422956-32422957(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422969-32422970(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32422994-32422995(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32423027-32423028(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32423034-32423035(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32423089-32423090(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32423110-32423111(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32423129-32423130(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32423245-32423246(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:32423333-32423334(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423379-32423380(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423421-32423422(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423444-32423445(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423469-32423470(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423554-32423555(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:32423760-32423761(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:32423789-32423790(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:32423841-32423842(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423850-32423851(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423872-32423873(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423880-32423881(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32423912-32423913(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:32424014-32424015(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:32424120-32424121(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32424225-32424226(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32424313-32424314(+) m6A 3'UTR       25683224//25569111 chr11:32424499-32424500(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr11:32424600-32424601(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:32424621-32424622(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:32424731-32424732(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32424754-32424755(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32424761-32424762(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32425681-32425682(+) m6A 3'UTR       25683224//25569111 chr11:32425759-32425760(+) m6A 3'UTR       25683224//25569111 chr11:32425820-32425821(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32425995-32425996(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr11:32426017-32426018(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32426056-32426057(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32426141-32426142(+) m6A 3'UTR       25683224//24981863//25569111 chr11:32426997-32426998(+) Y 3'UTR//exon       26075521 chr11:32427137-32427138(+) m6A 3'UTR       25683224//25569111 chr11:32427157-32427158(+) m6A 3'UTR       25683224//25569111 chr11:32427189-32427190(+) m6A 3'UTR       25683224//25569111 chr11:32427283-32427284(+) m6A 3'UTR       25683224//25569111 chr11:32427318-32427319(+) m6A 3'UTR       25683224//25569111 chr11:32427346-32427347(+) m6A 3'UTR       25683224//25569111 chr11:32427361-32427362(+) m6A 3'UTR       25683224//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Sh3pxd2b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar