Basic Information:

  VIRBase ID:  

VHID00648805

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Shprh:  NM_001284354     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Shprh
miRBase Accession/Entrez ID	MIMAT0001573	268281
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610103K11Rik//AA450458//AU024614//BC006883//D230017O13Rik//E130018M05

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Shprh	chr10:11151720-11151721(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11151732-11151733(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11151769-11151770(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11151789-11151790(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11151869-11151870(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11151902-11151903(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11152018-11152019(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr10:11152034-11152035(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr10:11152111-11152112(+) m6A CDS//exon       25683224//24981863//25569111//22608085 chr10:11152231-11152232(+) m6A CDS//exon       24981863//25569111 chr10:11152243-11152244(+) m6A CDS//exon       24981863//25569111 chr10:11159569-11159570(+) m6A CDS       25683224//22608085 chr10:11160542-11160543(+) m6A CDS       25683224//22608085 chr10:11162922-11162923(+) m6A CDS       25569111 chr10:11162977-11162978(+) m6A CDS       25683224//24981863//25569111 chr10:11163005-11163006(+) m6A CDS       25683224//24981863//25569111 chr10:11163050-11163051(+) m6A CDS       25683224//24981863//25569111 chr10:11164393-11164394(+) m6A CDS       25683224//25456834//24981863//25569111 chr10:11164426-11164427(+) m6A CDS       25456834//24981863//25569111 chr10:11164624-11164625(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11164632-11164633(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11164648-11164649(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11164666-11164667(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:11164716-11164717(+) m6A CDS       25412662//24981863//25456834//25569111//22608085 chr10:11164840-11164841(+) m6A CDS       25569111//22608085 chr10:11166580-11166581(+) m6A CDS//exon//intron       25683224//22608085 chr10:11166585-11166586(+) m6A CDS//exon//intron       25683224//22608085 chr10:11166636-11166637(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr10:11170264-11170265(+) m6A CDS//exon       25412662//24981863//25569111 chr10:11170400-11170401(+) m6A CDS//exon       24981863//25412662//25569111 chr10:11170408-11170409(+) m6A CDS//exon       24981863//25412662//25569111 chr10:11178800-11178801(+) m6A 3'UTR//CDS//exon       22608085 chr10:11178807-11178808(+) m6A 3'UTR//CDS//exon       22608085 chr10:11181513-11181514(+) m6A 3'UTR//CDS//exon       22608085 chr10:11181555-11181556(+) m6A 3'UTR//CDS//exon       22608085 chr10:11189739-11189740(+) m6A CDS//exon       24981863//22608085 chr10:11189764-11189765(+) m6A CDS//exon       24981863//22608085 chr10:11190990-11190991(+) m6A CDS//exon       24981863//22608085 chr10:11191005-11191006(+) m6A CDS//exon       24981863//22608085 chr10:11191050-11191051(+) m6A CDS//exon       24981863//22608085 chr10:11191056-11191057(+) m6A CDS//exon       24981863//22608085 chr10:11192497-11192498(+) m6A CDS//exon       24981863//22608085 chr10:11214625-11214626(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Shprh

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar