Basic Information:

  VIRBase ID:  

VHID00648753

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Lgi4:  NM_144556     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Lgi4
miRBase Accession/Entrez ID	MIMAT0001573	243914
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	c//clp//Lgil3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Lgi4	chr7:31850467(+) A-I      intronic chr7:31850040(+) A-I      intronic chr7:31850470(+) A-I      intronic chr7:31850475(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Lgi4	chr7:31065021(+) A-I intron -    22524474 chr7:31065448(+) A-I intron -    22524474 chr7:31065451(+) A-I intron -    22524474 chr7:31065456(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lgi4	chr7:31059659-31059660(+) m6A 5'UTR       25412662//22608085 chr7:31059666-31059667(+) m6A 5'UTR       25412662//22608085 chr7:31059691-31059692(+) m6A 5'UTR       25412662//24981863//22608085 chr7:31059699-31059700(+) m6A 5'UTR       25412662//24981863//22608085 chr7:31059707-31059708(+) m6A 5'UTR       25412662//24981863//22608085 chr7:31059750-31059751(+) m6A 5'UTR       25412662//24981863//22608085 chr7:31059763-31059764(+) m6A 5'UTR       25412662//24981863 chr7:31059772-31059773(+) m6A 5'UTR       25412662//24981863 chr7:31059778-31059779(+) m6A 5'UTR       25412662//24981863 chr7:31059899-31059900(+) m6A 5'UTR       25412662//24981863 chr7:31059920-31059921(+) m6A 5'UTR       25412662//24981863 chr7:31059991-31059992(+) m6A 5'UTR       25412662 chr7:31060129-31060130(+) m6A CDS       25412662 chr7:31067753-31067754(+) m6A CDS       25412662//24981863//22608085 chr7:31067787-31067788(+) m6A CDS       25412662//24981863//22608085 chr7:31067840-31067841(+) m6A CDS       25412662//24981863//22608085 chr7:31068967-31068968(+) m6A CDS       25412662//24981863//22608085 chr7:31069202-31069203(+) m6A 3'UTR       25412662//24981863//22608085 chr7:31069294-31069295(+) m6A 3'UTR       24981863//22608085 chr7:31069433-31069434(+) m6A 3'UTR       24981863 chr7:31069449-31069450(+) m6A 3'UTR       25412662//24981863 chr7:31069501-31069502(+) m6A 3'UTR       25412662//24981863 chr7:31069514-31069515(+) m6A 3'UTR       25412662//24981863 chr7:31069538-31069539(+) m6A 3'UTR       24981863 chr7:31069831-31069832(+) m6A 3'UTR       25412662//24981863 chr7:31070343-31070344(+) m6A 3'UTR       25412662 chr7:31070562-31070563(+) m6A 3'UTR       24981863 chr7:31070567-31070568(+) m6A 3'UTR       24981863 chr7:31070634-31070635(+) m6A 3'UTR       25412662//24981863 chr7:31070673-31070674(+) m6A 3'UTR       25412662//24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Lgi4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar