Detail Information

Basic Information:


  VIRBase ID:  

VHID00648738

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:           Kctd8:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-9 Kctd8
miRBase
Accession/Entrez ID
MIMAT0001573 243043
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - A730087N02Rik

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Kctd8
chr5:69109925-69109926(-) m6A 3'UTR       24981863
chr5:69109945-69109946(-) m6A 3'UTR       24981863//26404942//22608085
chr5:69109978-69109979(-) m6A 3'UTR       24981863//26404942//22608085
chr5:69110008-69110009(-) m6A 3'UTR       24981863//26404942//22608085
chr5:69110036-69110037(-) m6A 3'UTR       24981863//26404942
chr5:69110051-69110052(-) m6A 3'UTR       24981863//26404942
chr5:69110072-69110073(-) m6A 3'UTR       24981863//26404942
chr5:69110156-69110157(-) m6A 3'UTR       24981863//22608085
chr5:69110175-69110176(-) m6A 3'UTR       24981863//22608085
chr5:69110214-69110215(-) m6A 3'UTR       24981863//22608085
chr5:69110228-69110229(-) m6A 3'UTR       24981863//22608085
chr5:69110358-69110359(-) m6A CDS       24981863//22608085
chr5:69110489-69110490(-) m6A CDS       24981863//22608085
chr5:69110523-69110524(-) m6A CDS       24981863//22608085
chr5:69110530-69110531(-) m6A CDS       24981863//22608085
chr5:69110542-69110543(-) m6A CDS       24981863//22608085
chr5:69110583-69110584(-) m6A CDS       24981863//22608085
chr5:69110644-69110645(-) m6A CDS       24981863//22608085
chr5:69110708-69110709(-) m6A CDS       24981863//22608085
chr5:69110728-69110729(-) m6A CDS       24981863//22608085
chr5:69110752-69110753(-) m6A CDS       24981863//22608085
chr5:69110760-69110761(-) m6A CDS       24981863//22608085
chr5:69341026-69341027(-) m6A CDS       24981863
chr5:69341101-69341102(-) m6A CDS       24981863
chr5:69341448-69341449(-) m6A 5'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-9
Interactor2: Kctd8

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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