Basic Information:

  VIRBase ID:  

VHID00648728

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Tmem245:  NR_161227     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Tmem245
miRBase Accession/Entrez ID	MIMAT0001573	242474
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A630051L19Rik//AI957324//D730040F13Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmem245	chr4:56877423-56877424(-) m6A 3'UTR       25683224 chr4:56877442-56877443(-) m6A 3'UTR       25683224 chr4:56877482-56877483(-) m6A 3'UTR       25683224 chr4:56877569-56877570(-) m6A 3'UTR       24981863 chr4:56879494-56879495(-) m6A 3'UTR       24981863 chr4:56879621-56879622(-) m6A 3'UTR       24981863//25569111 chr4:56880056-56880057(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:56880076-56880077(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:56880105-56880106(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:56880122-56880123(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:56885636-56885637(-) m6A exon//intron       25683224//25456834//25412662//24981863//25569111 chr4:56885980-56885981(-) m6A exon//intron       24981863//25569111 chr4:56886024-56886025(-) m6A CDS//exon       24981863//25569111 chr4:56886042-56886043(-) m6A CDS//exon       24981863//25569111 chr4:56886065-56886066(-) m6A CDS//exon       24981863//25569111 chr4:56903733-56903734(-) m6A exon//intron       25683224 chr4:56903741-56903742(-) m6A exon//intron       25683224 chr4:56903928-56903929(-) m6A CDS//exon       25683224 chr4:56903936-56903937(-) m6A CDS//exon       25683224 chr4:56903969-56903970(-) m6A CDS//exon       25683224//22608085 chr4:56903993-56903994(-) m6A CDS//exon       25683224//22608085 chr4:56906242-56906243(-) m6A CDS//exon       25683224//22608085 chr4:56906250-56906251(-) m6A CDS//exon       25683224//22608085 chr4:56906284-56906285(-) m6A CDS//exon       25683224//22608085 chr4:56910192-56910193(-) Y CDS//exon       26075521 chr4:56910196-56910197(-) m6A CDS//exon       25683224//22608085 chr4:56911982-56911983(-) m6A exon//intron       25683224//22608085 chr4:56925195-56925196(-) m6A CDS//exon       24981863//22608085 chr4:56925205-56925206(-) m6A CDS//exon       24981863//22608085 chr4:56926199-56926200(-) m6A CDS//exon       24981863//22608085 chr4:56926241-56926242(-) m6A CDS//exon       25683224//24981863//22608085 chr4:56926276-56926277(-) m6A CDS//exon       25683224//22608085 chr4:56936390-56936391(-) m6A CDS//exon       25683224//22608085 chr4:56937972-56937973(-) m6A CDS//exon       25683224//22608085 chr4:56947317-56947318(-) m6A CDS//exon       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tmem245	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Tmem245

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar