Basic Information:

  VIRBase ID:  

VHID00648697

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Zfp563:  NM_001024950     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Zfp563
miRBase Accession/Entrez ID	MIMAT0001573	240068
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	D10628//D130054H01//NTfin7//Zfp41//Zfp413

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zfp563	chr17:33092537-33092538(+) m6A 5'UTR//intron       24981863//25569111//22608085 chr17:33092581-33092582(+) m6A 5'UTR//intron       24981863//25569111//22608085 chr17:33092587-33092588(+) m6A 5'UTR//intron       24981863//25569111//22608085 chr17:33102261-33102262(+) m6A CDS       24981863//25569111 chr17:33102332-33102333(+) m6A CDS       24981863 chr17:33102342-33102343(+) m6A CDS       24981863 chr17:33102596-33102597(+) m6A CDS       25456834//24981863 chr17:33104629-33104630(+) m6A CDS       25456834//24981863 chr17:33104650-33104651(+) m6A CDS       25456834//24981863 chr17:33104665-33104666(+) m6A CDS       25456834//24981863//22608085 chr17:33104709-33104710(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33104717-33104718(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33104760-33104761(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33104812-33104813(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33104844-33104845(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33104876-33104877(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:33104905-33104906(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:33104932-33104933(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33104989-33104990(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33104999-33105000(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33105016-33105017(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33105100-33105101(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33105184-33105185(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:33105251-33105252(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:33105268-33105269(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:33105352-33105353(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr17:33105367-33105368(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr17:33105520-33105521(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:33105661-33105662(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:33105755-33105756(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:33105797-33105798(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr17:33105852-33105853(+) m6A 3'UTR       24981863//25456834 chr17:33105909-33105910(+) m6A 3'UTR       24981863 chr17:33105917-33105918(+) m6A 3'UTR       24981863 chr17:33105945-33105946(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zfp563	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Zfp563

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar