Detail Information

Basic Information:


  VIRBase ID:  

VHID00648261

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:           Grhl1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-9 Grhl1
miRBase
Accession/Entrez ID
MIMAT0001573 195733
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - LBP-//LBP-32//MGR//Tcfcp2//Tcfcp2l2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Grhl1
chr12:24572298-24572299(+) m6A 5'UTR       25412662//24981863
chr12:24572326-24572327(+) m6A 5'UTR       25412662//24981863
chr12:24576008-24576009(+) m6A CDS       25412662
chr12:24576059-24576060(+) m6A CDS       25412662
chr12:24580768-24580769(+) m6A CDS//intron       25412662
chr12:24581329-24581330(+) m6A CDS       25412662
chr12:24581377-24581378(+) m6A CDS       25412662
chr12:24581523-24581524(+) m6A CDS       25412662
chr12:24581670-24581671(+) m6A CDS       25412662//24981863
chr12:24581677-24581678(+) m6A CDS       25412662//24981863
chr12:24581694-24581695(+) m6A CDS       25412662//24981863
chr12:24616170-24616171(+) m6A 3'UTR       25456834//24981863//25569111
chr12:24616191-24616192(+) m6A 3'UTR       25456834//24981863//25569111
chr12:24616199-24616200(+) m6A 3'UTR       25456834//24981863//25569111
chr12:24616439-24616440(+) m6A 3'UTR       24981863
chr12:24616462-24616463(+) m6A 3'UTR       24981863
chr12:24616470-24616471(+) m6A 3'UTR       24981863
chr12:24616489-24616490(+) m6A 3'UTR       24981863
chr12:24616852-24616853(+) m6A 3'UTR       25456834//24981863
chr12:24616857-24616858(+) m6A 3'UTR       25456834//24981863
chr12:24616946-24616947(+) m6A 3'UTR       24981863
chr12:24617013-24617014(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-9
Interactor2: Grhl1

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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