Basic Information:

  VIRBase ID:  

VHID00648198

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Ivns1abp:  NM_001039512     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Ivns1abp
miRBase Accession/Entrez ID	MIMAT0001573	117198
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1190004M08Rik//1700126I16Rik//AA960440//HSPC0//HSPC068//mKIAA0850//ND//ND1//Nd1-L//Nd1-S//NS//NS-1//NS1//NS1-BP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ivns1abp	chr1:151349426-151349427(+) m6A 5'UTR       24981863//25569111//26404942//22608085 chr1:151349463-151349464(+) m6A 5'UTR       24981863//25569111//26404942//22608085 chr1:151349482-151349483(+) m6A 5'UTR       24981863//25569111//26404942//22608085 chr1:151351891-151351892(+) m6A CDS       22608085 chr1:151353998-151353999(+) m6A CDS       22608085 chr1:151354086-151354087(+) m6A CDS       22608085 chr1:151354733-151354734(+) m6A CDS//intron       22608085 chr1:151355417-151355418(+) m6A 3'UTR//intron       24981863 chr1:151355441-151355442(+) m6A 3'UTR//intron       24981863 chr1:151359744-151359745(+) m6A 3'UTR//CDS       22608085 chr1:151359982-151359983(+) m6A 3'UTR//CDS       22608085 chr1:151360018-151360019(+) m6A 3'UTR//CDS       22608085 chr1:151360052-151360053(+) m6A 3'UTR//CDS       22608085 chr1:151360803-151360804(+) m6A 3'UTR//CDS       22608085//22575960 chr1:151360933-151360934(+) m6A 3'UTR//CDS       22608085//22575960 chr1:151361004-151361005(+) m6A 3'UTR//CDS       22608085 chr1:151361018-151361019(+) m6A 3'UTR//CDS       22608085 chr1:151361039-151361040(+) m6A 3'UTR//CDS       22608085 chr1:151361539-151361540(+) m6A 3'UTR//CDS       24981863//26404942//22608085 chr1:151361566-151361567(+) m6A 3'UTR//CDS       24981863//25569111//26404942//22608085 chr1:151361577-151361578(+) m6A 3'UTR//CDS       24981863//25569111//26404942//22608085 chr1:151361724-151361725(+) m6A 3'UTR//intron       24981863 chr1:151363115-151363116(+) m6A 3'UTR//CDS       24981863//26404942 chr1:151363376-151363377(+) m6A 3'UTR       26404942//22608085 chr1:151363383-151363384(+) m6A 3'UTR       26404942//22608085 chr1:151364303-151364304(+) Y 3'UTR//exon       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ivns1abp	Dendrite Hippocampal neurons     26938019 Dendrite Hippocampal neurons     16317045 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Ivns1abp

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar