Basic Information:

  VIRBase ID:  

VHID00648049

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Stk17b:  NM_133810     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Stk17b
miRBase Accession/Entrez ID	MIMAT0001573	98267
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	3110009A03Rik//AI120141//Dra//Drak2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Stk17b	chr1:53757230-53757231(-) m6A 3'UTR       - chr1:53757248-53757249(-) m6A 3'UTR       - chr1:53757370-53757371(-) m6A 3'UTR       25683224//24981863 chr1:53757462-53757463(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:53757511-53757512(-) m6A CDS       25683224//25456834//24981863//25569111 chr1:53757581-53757582(-) m6A CDS       25456834//25412662//24981863//25569111 chr1:53757590-53757591(-) m6A CDS       25456834//25412662//24981863//25569111 chr1:53757633-53757634(-) m6A CDS       25456834//25412662//25569111 chr1:53771776-53771777(-) m6A 5'UTR//CDS       25683224//22608085 chr1:53771800-53771801(-) m6A 5'UTR//CDS       25683224//22608085 chr1:53785178-53785179(-) m6A 5'UTR       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Stk17b	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Stk17b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar